Protein–RNA interactions for Protein: A6NHC0

CAPN8, Calpain-8, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8A6NHC0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.85
CAPN8A6NHC0 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CAPN8A6NHC0 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CAPN8A6NHC0 ABHD17AP4-201ENST00000411545 909 ntBASIC26.57■■□□□ 1.84
CAPN8A6NHC0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CAPN8A6NHC0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC26.56■■□□□ 1.84
CAPN8A6NHC0 AC087741.3-201ENST00000624270 1347 ntBASIC26.56■■□□□ 1.84
CAPN8A6NHC0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC26.55■■□□□ 1.84
CAPN8A6NHC0 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CAPN8A6NHC0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CAPN8A6NHC0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC26.54■■□□□ 1.84
CAPN8A6NHC0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CAPN8A6NHC0 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CAPN8A6NHC0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CAPN8A6NHC0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CAPN8A6NHC0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26.51■■□□□ 1.83
CAPN8A6NHC0 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CAPN8A6NHC0 AL135925.1-201ENST00000605920 1701 ntBASIC26.51■■□□□ 1.83
CAPN8A6NHC0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CAPN8A6NHC0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.5■■□□□ 1.83
CAPN8A6NHC0 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CAPN8A6NHC0 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC26.5■■□□□ 1.83
CAPN8A6NHC0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CAPN8A6NHC0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
CAPN8A6NHC0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
CAPN8A6NHC0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC26.49■■□□□ 1.83
CAPN8A6NHC0 HLA-V-202ENST00000446817 847 ntBASIC26.49■■□□□ 1.83
CAPN8A6NHC0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC26.49■■□□□ 1.83
CAPN8A6NHC0 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CAPN8A6NHC0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
CAPN8A6NHC0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CAPN8A6NHC0 ABCB10P1-201ENST00000614297 2181 ntBASIC26.47■■□□□ 1.83
CAPN8A6NHC0 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.47■■□□□ 1.83
CAPN8A6NHC0 AC010864.1-201ENST00000609407 1511 ntBASIC26.47■■□□□ 1.83
CAPN8A6NHC0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CAPN8A6NHC0 AC044849.2-201ENST00000606596 710 ntBASIC26.46■■□□□ 1.83
CAPN8A6NHC0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.45■■□□□ 1.83
CAPN8A6NHC0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CAPN8A6NHC0 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.45■■□□□ 1.82
CAPN8A6NHC0 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CAPN8A6NHC0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CAPN8A6NHC0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CAPN8A6NHC0 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC26.43■■□□□ 1.82
CAPN8A6NHC0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.43■■□□□ 1.82
CAPN8A6NHC0 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
CAPN8A6NHC0 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.43■■□□□ 1.82
CAPN8A6NHC0 MBP-237ENST00000579129 1052 ntTSL 5 BASIC26.41■■□□□ 1.82
CAPN8A6NHC0 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC26.4■■□□□ 1.82
CAPN8A6NHC0 ST7-AS1-201ENST00000456775 1889 ntBASIC26.39■■□□□ 1.82
CAPN8A6NHC0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CAPN8A6NHC0 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CAPN8A6NHC0 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
CAPN8A6NHC0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC26.39■■□□□ 1.82
CAPN8A6NHC0 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CAPN8A6NHC0 AC108673.1-201ENST00000510422 1159 ntBASIC26.38■■□□□ 1.81
CAPN8A6NHC0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CAPN8A6NHC0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC26.38■■□□□ 1.81
CAPN8A6NHC0 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CAPN8A6NHC0 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
CAPN8A6NHC0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC26.37■■□□□ 1.81
CAPN8A6NHC0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.37■■□□□ 1.81
CAPN8A6NHC0 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
CAPN8A6NHC0 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.36■■□□□ 1.81
CAPN8A6NHC0 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CAPN8A6NHC0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.35■■□□□ 1.81
CAPN8A6NHC0 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CAPN8A6NHC0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CAPN8A6NHC0 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN8A6NHC0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC26.34■■□□□ 1.81
CAPN8A6NHC0 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN8A6NHC0 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CAPN8A6NHC0 MIR6090-201ENST00000622481 60 ntBASIC26.33■■□□□ 1.81
CAPN8A6NHC0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CAPN8A6NHC0 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
CAPN8A6NHC0 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.8
CAPN8A6NHC0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CAPN8A6NHC0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC26.32■■□□□ 1.8
CAPN8A6NHC0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CAPN8A6NHC0 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN8A6NHC0 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CAPN8A6NHC0 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.31■■□□□ 1.8
CAPN8A6NHC0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.31■■□□□ 1.8
CAPN8A6NHC0 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN8A6NHC0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.3■■□□□ 1.8
CAPN8A6NHC0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CAPN8A6NHC0 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CAPN8A6NHC0 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.29■■□□□ 1.8
CAPN8A6NHC0 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
CAPN8A6NHC0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC26.28■■□□□ 1.8
CAPN8A6NHC0 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.28■■□□□ 1.8
CAPN8A6NHC0 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC26.28■■□□□ 1.8
CAPN8A6NHC0 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN8A6NHC0 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN8A6NHC0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN8A6NHC0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CAPN8A6NHC0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
CAPN8A6NHC0 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.26■■□□□ 1.79
CAPN8A6NHC0 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.26■■□□□ 1.79
CAPN8A6NHC0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC26.25■■□□□ 1.79
CAPN8A6NHC0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms