Protein–RNA interactions for Protein: A0A0K0K1A3

TRBV10-1, T-cell receptor beta variable 10-1(gene/pseudogene) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV10-1A0A0K0K1A3 AC010864.1-201ENST00000609407 1511 ntBASIC18.51■□□□□ 0.55
TRBV10-1A0A0K0K1A3 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRBV10-1A0A0K0K1A3 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV10-1A0A0K0K1A3 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV10-1A0A0K0K1A3 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV10-1A0A0K0K1A3 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.5■□□□□ 0.55
TRBV10-1A0A0K0K1A3 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV10-1A0A0K0K1A3 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRBV10-1A0A0K0K1A3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV10-1A0A0K0K1A3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRBV10-1A0A0K0K1A3 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRBV10-1A0A0K0K1A3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC18.49■□□□□ 0.55
TRBV10-1A0A0K0K1A3 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRBV10-1A0A0K0K1A3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
TRBV10-1A0A0K0K1A3 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV10-1A0A0K0K1A3 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
TRBV10-1A0A0K0K1A3 AL139393.2-201ENST00000608721 2025 ntBASIC18.47■□□□□ 0.55
TRBV10-1A0A0K0K1A3 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV10-1A0A0K0K1A3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC18.47■□□□□ 0.55
TRBV10-1A0A0K0K1A3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV10-1A0A0K0K1A3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TRBV10-1A0A0K0K1A3 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV10-1A0A0K0K1A3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV10-1A0A0K0K1A3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TRBV10-1A0A0K0K1A3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC18.46■□□□□ 0.54
TRBV10-1A0A0K0K1A3 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.45■□□□□ 0.54
TRBV10-1A0A0K0K1A3 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TRBV10-1A0A0K0K1A3 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC18.44■□□□□ 0.54
TRBV10-1A0A0K0K1A3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
TRBV10-1A0A0K0K1A3 AC142086.6-201ENST00000621154 1765 ntBASIC18.43■□□□□ 0.54
TRBV10-1A0A0K0K1A3 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.43■□□□□ 0.54
TRBV10-1A0A0K0K1A3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV10-1A0A0K0K1A3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
TRBV10-1A0A0K0K1A3 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV10-1A0A0K0K1A3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV10-1A0A0K0K1A3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
TRBV10-1A0A0K0K1A3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
TRBV10-1A0A0K0K1A3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV10-1A0A0K0K1A3 EBPL-202ENST00000378268 680 ntTSL 3 BASIC18.4■□□□□ 0.54
TRBV10-1A0A0K0K1A3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV10-1A0A0K0K1A3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC18.4■□□□□ 0.54
TRBV10-1A0A0K0K1A3 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV10-1A0A0K0K1A3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV10-1A0A0K0K1A3 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV10-1A0A0K0K1A3 AL391121.1-201ENST00000607967 1349 ntBASIC18.39■□□□□ 0.53
TRBV10-1A0A0K0K1A3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV10-1A0A0K0K1A3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV10-1A0A0K0K1A3 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV10-1A0A0K0K1A3 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV10-1A0A0K0K1A3 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV10-1A0A0K0K1A3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV10-1A0A0K0K1A3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV10-1A0A0K0K1A3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV10-1A0A0K0K1A3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
TRBV10-1A0A0K0K1A3 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV10-1A0A0K0K1A3 AP004833.2-201ENST00000532228 1454 ntBASIC18.34■□□□□ 0.53
TRBV10-1A0A0K0K1A3 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.34■□□□□ 0.53
TRBV10-1A0A0K0K1A3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV10-1A0A0K0K1A3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
TRBV10-1A0A0K0K1A3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.33■□□□□ 0.52
TRBV10-1A0A0K0K1A3 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRBV10-1A0A0K0K1A3 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRBV10-1A0A0K0K1A3 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV10-1A0A0K0K1A3 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV10-1A0A0K0K1A3 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV10-1A0A0K0K1A3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRBV10-1A0A0K0K1A3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRBV10-1A0A0K0K1A3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
TRBV10-1A0A0K0K1A3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV10-1A0A0K0K1A3 AC097358.2-201ENST00000607541 1159 ntBASIC18.3■□□□□ 0.52
TRBV10-1A0A0K0K1A3 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV10-1A0A0K0K1A3 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRBV10-1A0A0K0K1A3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
TRBV10-1A0A0K0K1A3 DRD5P2-201ENST00000421395 2012 ntBASIC18.29■□□□□ 0.52
TRBV10-1A0A0K0K1A3 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TRBV10-1A0A0K0K1A3 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRBV10-1A0A0K0K1A3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRBV10-1A0A0K0K1A3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 AC136428.2-201ENST00000563187 214 ntBASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 CAHM-201ENST00000604200 896 ntBASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
TRBV10-1A0A0K0K1A3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC18.27■□□□□ 0.52
TRBV10-1A0A0K0K1A3 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV10-1A0A0K0K1A3 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
TRBV10-1A0A0K0K1A3 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms