Protein–RNA interactions for Protein: A0A0B4J276

TRAV25, T-cell receptor alpha variable 25 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV25A0A0B4J276 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRAV25A0A0B4J276 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV25A0A0B4J276 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV25A0A0B4J276 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV25A0A0B4J276 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV25A0A0B4J276 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC19.77■□□□□ 0.76
TRAV25A0A0B4J276 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV25A0A0B4J276 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV25A0A0B4J276 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV25A0A0B4J276 CIB2-204ENST00000557846 934 ntTSL 3 BASIC19.74■□□□□ 0.75
TRAV25A0A0B4J276 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRAV25A0A0B4J276 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRAV25A0A0B4J276 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV25A0A0B4J276 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAV25A0A0B4J276 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV25A0A0B4J276 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV25A0A0B4J276 MIR6090-201ENST00000622481 60 ntBASIC19.72■□□□□ 0.75
TRAV25A0A0B4J276 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAV25A0A0B4J276 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAV25A0A0B4J276 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV25A0A0B4J276 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV25A0A0B4J276 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV25A0A0B4J276 MLEC-202ENST00000412616 841 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAV25A0A0B4J276 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRAV25A0A0B4J276 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV25A0A0B4J276 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAV25A0A0B4J276 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV25A0A0B4J276 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.68■□□□□ 0.74
TRAV25A0A0B4J276 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV25A0A0B4J276 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 DUX4L29-201ENST00000425409 679 ntBASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 EI24-212ENST00000615917 1407 ntTSL 2 BASIC19.67■□□□□ 0.74
TRAV25A0A0B4J276 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV25A0A0B4J276 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV25A0A0B4J276 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV25A0A0B4J276 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV25A0A0B4J276 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV25A0A0B4J276 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV25A0A0B4J276 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
TRAV25A0A0B4J276 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV25A0A0B4J276 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAV25A0A0B4J276 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV25A0A0B4J276 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC19.64■□□□□ 0.73
TRAV25A0A0B4J276 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC19.64■□□□□ 0.73
TRAV25A0A0B4J276 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV25A0A0B4J276 ST7-AS1-201ENST00000456775 1889 ntBASIC19.64■□□□□ 0.73
TRAV25A0A0B4J276 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV25A0A0B4J276 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
TRAV25A0A0B4J276 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRAV25A0A0B4J276 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV25A0A0B4J276 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
TRAV25A0A0B4J276 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC19.61■□□□□ 0.73
TRAV25A0A0B4J276 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC19.61■□□□□ 0.73
TRAV25A0A0B4J276 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV25A0A0B4J276 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV25A0A0B4J276 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV25A0A0B4J276 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV25A0A0B4J276 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV25A0A0B4J276 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
TRAV25A0A0B4J276 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV25A0A0B4J276 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.6■□□□□ 0.73
TRAV25A0A0B4J276 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV25A0A0B4J276 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV25A0A0B4J276 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
TRAV25A0A0B4J276 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
TRAV25A0A0B4J276 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
TRAV25A0A0B4J276 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC19.59■□□□□ 0.73
TRAV25A0A0B4J276 AC021231.2-201ENST00000594613 730 ntBASIC19.59■□□□□ 0.73
TRAV25A0A0B4J276 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.58■□□□□ 0.72
TRAV25A0A0B4J276 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV25A0A0B4J276 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV25A0A0B4J276 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV25A0A0B4J276 HGH1-207ENST00000628266 258 ntTSL 5 BASIC19.58■□□□□ 0.72
TRAV25A0A0B4J276 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
TRAV25A0A0B4J276 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV25A0A0B4J276 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV25A0A0B4J276 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
TRAV25A0A0B4J276 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV25A0A0B4J276 ABHD17AP4-201ENST00000411545 909 ntBASIC19.56■□□□□ 0.72
TRAV25A0A0B4J276 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV25A0A0B4J276 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
TRAV25A0A0B4J276 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.55■□□□□ 0.72
TRAV25A0A0B4J276 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
TRAV25A0A0B4J276 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV25A0A0B4J276 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV25A0A0B4J276 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV25A0A0B4J276 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV25A0A0B4J276 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV25A0A0B4J276 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV25A0A0B4J276 AC127502.1-201ENST00000399971 1502 ntBASIC19.53■□□□□ 0.72
TRAV25A0A0B4J276 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV25A0A0B4J276 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
TRAV25A0A0B4J276 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms