Protein–RNA interactions for Protein: A0A0B4J237

TRAV8-2, T-cell receptor alpha variable 8-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-2A0A0B4J237 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC19.87■□□□□ 0.77
TRAV8-2A0A0B4J237 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRAV8-2A0A0B4J237 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV8-2A0A0B4J237 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRAV8-2A0A0B4J237 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRAV8-2A0A0B4J237 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV8-2A0A0B4J237 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
TRAV8-2A0A0B4J237 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRAV8-2A0A0B4J237 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRAV8-2A0A0B4J237 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC19.83■□□□□ 0.77
TRAV8-2A0A0B4J237 AC010864.1-201ENST00000609407 1511 ntBASIC19.82■□□□□ 0.76
TRAV8-2A0A0B4J237 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC19.82■□□□□ 0.76
TRAV8-2A0A0B4J237 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC19.82■□□□□ 0.76
TRAV8-2A0A0B4J237 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
TRAV8-2A0A0B4J237 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-2A0A0B4J237 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
TRAV8-2A0A0B4J237 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRAV8-2A0A0B4J237 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-2A0A0B4J237 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-2A0A0B4J237 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-2A0A0B4J237 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRAV8-2A0A0B4J237 AL139393.2-201ENST00000608721 2025 ntBASIC19.8■□□□□ 0.76
TRAV8-2A0A0B4J237 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC19.79■□□□□ 0.76
TRAV8-2A0A0B4J237 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-2A0A0B4J237 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-2A0A0B4J237 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-2A0A0B4J237 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.78■□□□□ 0.76
TRAV8-2A0A0B4J237 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-2A0A0B4J237 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRAV8-2A0A0B4J237 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRAV8-2A0A0B4J237 AL391121.1-201ENST00000607967 1349 ntBASIC19.77■□□□□ 0.76
TRAV8-2A0A0B4J237 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
TRAV8-2A0A0B4J237 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRAV8-2A0A0B4J237 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-2A0A0B4J237 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-2A0A0B4J237 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-2A0A0B4J237 AC136428.2-201ENST00000563187 214 ntBASIC19.76■□□□□ 0.75
TRAV8-2A0A0B4J237 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRAV8-2A0A0B4J237 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 CAHM-201ENST00000604200 896 ntBASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRAV8-2A0A0B4J237 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-2A0A0B4J237 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-2A0A0B4J237 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TRAV8-2A0A0B4J237 EBPL-202ENST00000378268 680 ntTSL 3 BASIC19.73■□□□□ 0.75
TRAV8-2A0A0B4J237 DENR-202ENST00000455982 1052 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV8-2A0A0B4J237 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC19.73■□□□□ 0.75
TRAV8-2A0A0B4J237 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-2A0A0B4J237 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-2A0A0B4J237 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAV8-2A0A0B4J237 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-2A0A0B4J237 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-2A0A0B4J237 AC097358.2-201ENST00000607541 1159 ntBASIC19.71■□□□□ 0.75
TRAV8-2A0A0B4J237 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAV8-2A0A0B4J237 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
TRAV8-2A0A0B4J237 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAV8-2A0A0B4J237 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-2A0A0B4J237 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-2A0A0B4J237 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAV8-2A0A0B4J237 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
TRAV8-2A0A0B4J237 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
TRAV8-2A0A0B4J237 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
TRAV8-2A0A0B4J237 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAV8-2A0A0B4J237 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAV8-2A0A0B4J237 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-2A0A0B4J237 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAV8-2A0A0B4J237 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
TRAV8-2A0A0B4J237 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC19.66■□□□□ 0.74
TRAV8-2A0A0B4J237 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
TRAV8-2A0A0B4J237 AC142086.6-201ENST00000621154 1765 ntBASIC19.66■□□□□ 0.74
TRAV8-2A0A0B4J237 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
TRAV8-2A0A0B4J237 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC19.66■□□□□ 0.74
TRAV8-2A0A0B4J237 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC19.65■□□□□ 0.74
TRAV8-2A0A0B4J237 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
TRAV8-2A0A0B4J237 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
TRAV8-2A0A0B4J237 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRAV8-2A0A0B4J237 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
TRAV8-2A0A0B4J237 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-2A0A0B4J237 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-2A0A0B4J237 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-2A0A0B4J237 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
TRAV8-2A0A0B4J237 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
TRAV8-2A0A0B4J237 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV8-2A0A0B4J237 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRAV8-2A0A0B4J237 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC19.62■□□□□ 0.73
TRAV8-2A0A0B4J237 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV8-2A0A0B4J237 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV8-2A0A0B4J237 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV8-2A0A0B4J237 DRD5P2-201ENST00000421395 2012 ntBASIC19.61■□□□□ 0.73
TRAV8-2A0A0B4J237 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
TRAV8-2A0A0B4J237 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRAV8-2A0A0B4J237 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-2A0A0B4J237 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC19.6■□□□□ 0.73
TRAV8-2A0A0B4J237 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRAV8-2A0A0B4J237 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
TRAV8-2A0A0B4J237 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms