Protein–RNA interactions for Protein: A0A0B4J1Y9

IGHV3-72, Immunoglobulin heavy variable 3-72, humanhuman

Predictions only

Length 119 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-72A0A0B4J1Y9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
IGHV3-72A0A0B4J1Y9 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IGHV3-72A0A0B4J1Y9 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
IGHV3-72A0A0B4J1Y9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
IGHV3-72A0A0B4J1Y9 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
IGHV3-72A0A0B4J1Y9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.27■■□□□ 1
IGHV3-72A0A0B4J1Y9 AC010864.1-201ENST00000609407 1511 ntBASIC21.27■■□□□ 1
IGHV3-72A0A0B4J1Y9 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IGHV3-72A0A0B4J1Y9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
IGHV3-72A0A0B4J1Y9 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.26■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.26■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 DUX4L28-201ENST00000623687 678 ntBASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 AC139426.1-201ENST00000568218 2529 ntBASIC21.21■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
IGHV3-72A0A0B4J1Y9 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.2■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC21.2■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 MIR3665-201ENST00000578708 105 ntBASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 AP006261.1-201ENST00000584783 668 ntBASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC21.18■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 AL162393.1-201ENST00000437852 946 ntBASIC21.18■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.18■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 ABCB10P3-201ENST00000561950 2166 ntBASIC21.17■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
IGHV3-72A0A0B4J1Y9 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.13■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC21.13■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC21.11■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 AC087741.3-201ENST00000624270 1347 ntBASIC21.08■□□□□ 0.97
IGHV3-72A0A0B4J1Y9 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC21.07■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 RPS2P35-201ENST00000443417 897 ntBASIC21.07■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.06■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC21.05■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 MIR6090-201ENST00000622481 60 ntBASIC21.04■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
IGHV3-72A0A0B4J1Y9 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms