Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 PKP4-218ENST00000629219 162 ntTSL 5 BASIC9.14□□□□□ -0.95
SLC1A1P43005 PCAT14-203ENST00000629869 976 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SLC1A1P43005 MIR3150A-201ENST00000636546 80 ntBASIC9.14□□□□□ -0.95
SLC1A1P43005 GC-208ENST00000513476 1567 ntTSL 5 BASIC9.14□□□□□ -0.95
SLC1A1P43005 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SLC1A1P43005 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC9.14□□□□□ -0.95
SLC1A1P43005 KIF23-203ENST00000395392 3357 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SLC1A1P43005 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SLC1A1P43005 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
SLC1A1P43005 TDP1-203ENST00000393454 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SLC1A1P43005 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
SLC1A1P43005 ANKFN1-202ENST00000566473 3840 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
SLC1A1P43005 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
SLC1A1P43005 NECAP1-210ENST00000638237 2517 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 GBP4-201ENST00000355754 6127 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 XIAP-201ENST00000355640 8584 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 CLASP1-202ENST00000397587 7915 ntTSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 TCF7L2-216ENST00000534894 3778 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 ZNF268-206ENST00000536899 3236 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 BCO2-201ENST00000357685 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 ADGRF1-201ENST00000283297 2142 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC9.13□□□□□ -0.95
SLC1A1P43005 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 AKAP10-202ENST00000395536 1815 ntTSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
SLC1A1P43005 TCF4-207ENST00000540999 2572 ntTSL 2 BASIC9.13□□□□□ -0.95
SLC1A1P43005 C14orf2-201ENST00000286953 643 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 FABP5-201ENST00000297258 851 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 RNU1-7P-201ENST00000364105 164 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 MORN5-201ENST00000373764 705 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 AL583835.2-203ENST00000407271 440 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 RN7SKP94-201ENST00000411044 284 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 LINC02539-201ENST00000411615 737 ntTSL 2 BASIC9.13□□□□□ -0.95
SLC1A1P43005 Z98751.1-201ENST00000413827 381 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 AL353779.2-201ENST00000424917 308 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 S100A13-204ENST00000440685 686 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 Z69666.1-201ENST00000445733 801 ntTSL 3 BASIC9.13□□□□□ -0.95
SLC1A1P43005 DCD-202ENST00000456047 670 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 SNX18P4-201ENST00000456554 838 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 RN7SL318P-201ENST00000471955 297 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 RN7SL698P-201ENST00000480095 302 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 PAX8-211ENST00000497038 816 ntTSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 RN7SL62P-201ENST00000498506 297 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 AC112173.1-201ENST00000505876 327 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 IGHVIII-51-1-201ENST00000519403 302 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 IGKV3-34-201ENST00000521692 293 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 OR4B2P-201ENST00000527724 882 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 AC027779.1-201ENST00000530492 516 ntTSL 3 BASIC9.13□□□□□ -0.95
SLC1A1P43005 AC087379.2-201ENST00000532242 471 ntTSL 3 BASIC9.13□□□□□ -0.95
SLC1A1P43005 OR7E105P-201ENST00000555893 993 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 AC018618.1-202ENST00000559590 395 ntTSL 3 BASIC9.13□□□□□ -0.95
SLC1A1P43005 C6orf229-201ENST00000565469 814 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 AC018521.3-201ENST00000581213 816 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 AC020917.2-201ENST00000587343 401 ntTSL 3 BASIC9.13□□□□□ -0.95
SLC1A1P43005 AC091810.1-201ENST00000603131 325 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 NDE1P2-201ENST00000605569 1105 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 ATP6V1C1-203ENST00000518857 1501 ntTSL 2 BASIC9.13□□□□□ -0.95
SLC1A1P43005 MXRA7-207ENST00000592148 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 PGR-202ENST00000325455 13748 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 KIAA1328-207ENST00000591619 5881 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 CLDN2-203ENST00000541806 3150 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 ZNF143-204ENST00000396604 2696 ntAPPRIS ALT1 TSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 ZNF225-204ENST00000590612 2404 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 NLGN4Y-203ENST00000382868 5338 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 SYNPR-201ENST00000295894 2607 ntAPPRIS ALT1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 LINC00547-201ENST00000612438 3314 ntTSL 2 BASIC9.13□□□□□ -0.95
SLC1A1P43005 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
SLC1A1P43005 SPATA31A6-201ENST00000332857 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 TRIT1-203ENST00000441669 1851 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 AC004491.1-201ENST00000623029 1882 ntBASIC9.13□□□□□ -0.95
SLC1A1P43005 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC9.13□□□□□ -0.95
SLC1A1P43005 SRSF10-207ENST00000453840 1808 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 MTHFD1L-212ENST00000618312 3159 ntTSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 CGNL1-201ENST00000281282 7224 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 OR51D1-202ENST00000641817 3561 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SLC1A1P43005 YIPF5-201ENST00000274496 3147 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 DYNLT1-202ENST00000367088 2891 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 TTC26-202ENST00000430935 4198 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 TTLL9-206ENST00000535842 3261 ntAPPRIS P2 TSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 LINC00939-202ENST00000507313 2819 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 CTNND1-215ENST00000526938 3489 ntTSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 PTK2-203ENST00000430260 1940 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 DCN-220ENST00000552962 1930 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 ZNF844-201ENST00000439326 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC9.12□□□□□ -0.95
SLC1A1P43005 RN7SKP173-201ENST00000362821 315 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 CLDN20-201ENST00000367165 1209 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SLC1A1P43005 ZDHHC11B-201ENST00000382776 1116 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SLC1A1P43005 BECN1P2-201ENST00000407947 812 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 HMGN1P34-201ENST00000413023 290 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 FBXO36-IT1-201ENST00000432957 582 ntTSL 3 BASIC9.12□□□□□ -0.95
SLC1A1P43005 RPS29P3-201ENST00000439929 171 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 AL031289.1-201ENST00000440100 471 ntTSL 3 BASIC9.12□□□□□ -0.95
SLC1A1P43005 RPL12P44-201ENST00000442319 502 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 PMS2P10-201ENST00000447708 612 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 TARDBPP2-201ENST00000448913 1231 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 RN7SL724P-201ENST00000461895 271 ntBASIC9.12□□□□□ -0.95
SLC1A1P43005 ADAM2-205ENST00000521880 2125 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 63.8 ms