Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC8.06□□□□□ -1.12
P04436 ZNF365-204ENST00000395251 2695 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
P04436 AC130365.1-201ENST00000530524 1553 ntBASIC8.05□□□□□ -1.12
P04436 AC100827.3-201ENST00000566291 2155 ntBASIC8.05□□□□□ -1.12
P04436 HKR1-213ENST00000589392 2152 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
P04436 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 TSC22D1-201ENST00000261489 3135 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 TOP1-201ENST00000361337 3738 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 ZNF462-204ENST00000441147 4691 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 AL513548.3-201ENST00000611708 2865 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 DCLRE1C-204ENST00000378246 2637 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 RSL24D1-201ENST00000260443 2015 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 ZNF197-205ENST00000396058 4299 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 NPC2-203ENST00000541064 1436 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 LETM2-207ENST00000523983 1776 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 SHROOM4-202ENST00000376020 9556 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
P04436 ACSL6-206ENST00000379255 2301 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 ZNF254-201ENST00000339642 511 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 RNA5SP78-201ENST00000364622 118 ntBASIC8.05□□□□□ -1.12
P04436 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC8.05□□□□□ -1.12
P04436 RN7SKP110-201ENST00000410146 285 ntBASIC8.05□□□□□ -1.12
P04436 RPL7AP72-201ENST00000417266 768 ntBASIC8.05□□□□□ -1.12
P04436 RPL36P2-201ENST00000426026 315 ntBASIC8.05□□□□□ -1.12
P04436 DAB1-AS1-203ENST00000432897 656 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 SDHDP2-201ENST00000436937 465 ntBASIC8.05□□□□□ -1.12
P04436 AC091808.1-201ENST00000438867 786 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
P04436 ZNF341-AS1-203ENST00000443171 642 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 MT1G-202ENST00000444837 406 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 AL392003.2-201ENST00000451015 679 ntBASIC8.05□□□□□ -1.12
P04436 TUBB4BP2-201ENST00000454125 798 ntBASIC8.05□□□□□ -1.12
P04436 ZNF337-AS1-206ENST00000455791 650 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 AC004448.4-203ENST00000456537 441 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 AC008481.2-201ENST00000483614 531 ntBASIC8.05□□□□□ -1.12
P04436 AC091951.4-201ENST00000512746 332 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 ALG1L12P-201ENST00000515046 434 ntBASIC8.05□□□□□ -1.12
P04436 IGKV2D-18-201ENST00000519785 375 ntBASIC8.05□□□□□ -1.12
P04436 ANAPC15-211ENST00000542531 812 ntAPPRIS P3 TSL 5 BASIC8.05□□□□□ -1.12
P04436 AP000820.1-201ENST00000545912 506 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 AC018448.2-201ENST00000548295 305 ntBASIC8.05□□□□□ -1.12
P04436 AC023794.4-201ENST00000551732 754 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 AL392023.2-201ENST00000554687 785 ntTSL 4 BASIC8.05□□□□□ -1.12
P04436 AL133163.2-201ENST00000555024 624 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC8.05□□□□□ -1.12
P04436 TP53TG3HP-201ENST00000563487 346 ntBASIC8.05□□□□□ -1.12
P04436 AC109597.1-201ENST00000564016 786 ntTSL 4 BASIC8.05□□□□□ -1.12
P04436 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 RN7SL246P-201ENST00000584467 296 ntBASIC8.05□□□□□ -1.12
P04436 ZNF793-AS1-205ENST00000589025 560 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 EIF5AP3-201ENST00000589460 462 ntBASIC8.05□□□□□ -1.12
P04436 AC003991.1-203ENST00000591739 719 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 AP002856.2-202ENST00000606885 755 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC8.05□□□□□ -1.12
P04436 AC106733.1-201ENST00000624476 1038 ntBASIC8.05□□□□□ -1.12
P04436 TMEM182-211ENST00000640575 1155 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 GPLD1-201ENST00000230036 3489 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 PRR27-201ENST00000344526 3127 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 CLEC4M-204ENST00000359059 1733 ntAPPRIS ALT2 TSL 5 BASIC8.05□□□□□ -1.12
P04436 CCT5-213ENST00000515390 1728 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 SLC34A2-201ENST00000382051 4122 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 CLUHP3-206ENST00000562354 4117 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 ELP3-219ENST00000537665 3053 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 DYNLRB1-201ENST00000300469 1464 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 OLFM5P-201ENST00000411807 1478 ntBASIC8.05□□□□□ -1.12
P04436 AC037487.1-201ENST00000583416 2474 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 ZNF728-201ENST00000594710 2015 ntAPPRIS P1 TSL 3 BASIC8.05□□□□□ -1.12
P04436 AP001043.1-202ENST00000380931 5027 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 MIR3976HG-202ENST00000566533 1690 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
P04436 SETD5-205ENST00000407969 6463 ntTSL 5 BASIC8.05□□□□□ -1.12
P04436 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC8.05□□□□□ -1.12
P04436 LINC00607-205ENST00000445174 3690 ntTSL 2 BASIC8.05□□□□□ -1.12
P04436 ADGRF4-202ENST00000327753 3074 ntAPPRIS P1 TSL 2 BASIC8.04□□□□□ -1.12
P04436 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 GALK2-203ENST00000544523 1950 ntTSL 2 BASIC8.04□□□□□ -1.12
P04436 ADH5-201ENST00000296412 2615 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 ADGRE3-205ENST00000599900 2099 ntTSL 5 BASIC8.04□□□□□ -1.12
P04436 ZNF711-203ENST00000373165 4124 ntAPPRIS P3 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 FO393415.1-201ENST00000314481 2255 ntTSL 2 BASIC8.04□□□□□ -1.12
P04436 TCF4-208ENST00000543082 2399 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 ASNSD1-201ENST00000260952 2450 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 TNIK-203ENST00000357327 3996 ntAPPRIS ALT2 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 AC002480.4-201ENST00000414116 2592 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 RNA5SP74-201ENST00000363538 109 ntBASIC8.04□□□□□ -1.12
P04436 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC8.04□□□□□ -1.12
P04436 U3.33-201ENST00000408117 204 ntBASIC8.04□□□□□ -1.12
P04436 AL645937.5-202ENST00000415595 944 ntBASIC8.04□□□□□ -1.12
P04436 AL591896.1-201ENST00000420211 491 ntTSL 2 BASIC8.04□□□□□ -1.12
P04436 SPCS1-202ENST00000423431 822 ntTSL 3 BASIC8.04□□□□□ -1.12
P04436 SLC8A1-AS1-204ENST00000427354 790 ntTSL 3 BASIC8.04□□□□□ -1.12
P04436 AL355149.1-201ENST00000438396 882 ntBASIC8.04□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms