Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 MFAP5-203ENST00000433590 2308 ntTSL 2 BASIC9.34□□□□□ -0.91
MTHFRP42898 NOS2-201ENST00000313735 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MTHFRP42898 ZNF146-202ENST00000456324 3780 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
MTHFRP42898 PIEZO2-202ENST00000383408 9718 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
MTHFRP42898 NECAP1-201ENST00000339754 2593 ntAPPRIS P2 TSL 1 (best) BASIC9.34□□□□□ -0.91
MTHFRP42898 EPB41-204ENST00000356093 5857 ntTSL 5 BASIC9.34□□□□□ -0.91
MTHFRP42898 FIGNL1-206ENST00000433017 3626 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
MTHFRP42898 AC091152.4-201ENST00000623480 3483 ntBASIC9.34□□□□□ -0.91
MTHFRP42898 RPS6-204ENST00000380394 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
MTHFRP42898 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC9.34□□□□□ -0.91
MTHFRP42898 CD22-201ENST00000085219 3268 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
MTHFRP42898 BBS7-201ENST00000264499 3752 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.92
MTHFRP42898 NUMA1-201ENST00000351960 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
MTHFRP42898 MAGEB16-205ENST00000399992 1734 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.92
MTHFRP42898 RAD54L2-201ENST00000409535 9776 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.92
MTHFRP42898 CACNA2D4-221ENST00000586184 3499 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 DNAJC5G-204ENST00000406962 1562 ntTSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 AL391988.1-201ENST00000614747 1553 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 KPNA2-201ENST00000330459 2181 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 LARP1B-202ENST00000394288 2151 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 AL157895.1-201ENST00000451713 1404 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 POLR3G-204ENST00000504930 3251 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
MTHFRP42898 MCM3AP-AS1-201ENST00000414659 2539 ntTSL 2 BASIC9.33□□□□□ -0.92
MTHFRP42898 POP4-202ENST00000585603 3385 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 ZNF780A-206ENST00000595687 3472 ntAPPRIS P3 TSL 2 BASIC9.33□□□□□ -0.92
MTHFRP42898 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 SCIMP-203ENST00000574081 2383 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 LRRC4-201ENST00000249363 3828 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 OR10G4-201ENST00000320891 936 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
MTHFRP42898 SPINK6-201ENST00000325630 686 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
MTHFRP42898 TRBV23OR9-2-201ENST00000390389 335 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
MTHFRP42898 LINC01399-201ENST00000423311 648 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 RPSAP8-201ENST00000429844 889 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 AC019197.1-207ENST00000431341 635 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 AL138881.1-201ENST00000443445 789 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 SEPHS1P7-201ENST00000452995 1177 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 CASQ1-202ENST00000467691 595 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 AC010343.3-201ENST00000512323 446 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 STMN2-203ENST00000518491 585 ntTSL 2 BASIC9.33□□□□□ -0.92
MTHFRP42898 AC003991.2-201ENST00000520993 576 ntTSL 4 BASIC9.33□□□□□ -0.92
MTHFRP42898 AP005597.3-201ENST00000532369 799 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 AC005871.2-201ENST00000549104 526 ntTSL 4 BASIC9.33□□□□□ -0.92
MTHFRP42898 AC027013.1-201ENST00000554412 1057 ntTSL 2 BASIC9.33□□□□□ -0.92
MTHFRP42898 AC109630.1-201ENST00000558846 730 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 AC060766.4-201ENST00000592117 537 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 ZNF528-210ENST00000594530 544 ntTSL 3 BASIC9.33□□□□□ -0.92
MTHFRP42898 AC104117.5-201ENST00000606195 547 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 ADAL-208ENST00000610420 974 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 RBM22P6-201ENST00000611682 867 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 uc_338.2-201ENST00000612963 182 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 GNAS-AS1_2.1-201ENST00000613404 114 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 AC079602.4-201ENST00000637836 532 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 RAP2C-205ENST00000620646 3341 ntTSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 TMEM242-202ENST00000400788 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 ARHGEF26-205ENST00000496710 3781 ntTSL 2 BASIC9.33□□□□□ -0.92
MTHFRP42898 LINC01641-202ENST00000445817 1971 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 ZNF185-201ENST00000318504 4148 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 NBPF19-202ENST00000426482 2344 ntTSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 ZNF518A-201ENST00000316045 7277 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 EXOSC9-201ENST00000243498 1481 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 BTN2A3P-201ENST00000377662 1836 ntBASIC9.33□□□□□ -0.92
MTHFRP42898 HTR4-202ENST00000362016 2979 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 DNAH11-201ENST00000328843 13917 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
MTHFRP42898 MOV10-202ENST00000369644 4100 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
MTHFRP42898 NLRP1-214ENST00000577119 4200 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 KIAA1217-207ENST00000396445 5706 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 AL513523.1-201ENST00000417868 1309 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 MICAL2-217ENST00000527546 3358 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 ZEB2-201ENST00000303660 3913 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 IRF2-201ENST00000393593 2303 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 MTF2-214ENST00000545708 4046 ntTSL 2 BASIC9.32□□□□□ -0.92
MTHFRP42898 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 AC098657.2-201ENST00000567886 1976 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 SZRD1-202ENST00000401089 3447 ntTSL 2 BASIC9.32□□□□□ -0.92
MTHFRP42898 TRIM39-202ENST00000376659 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 NTRK3-220ENST00000626019 2741 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 PAX6-273ENST00000640610 2730 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 GJB2-202ENST00000382848 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 NPIPA1-201ENST00000328085 1084 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 CLEC12B-201ENST00000338896 1097 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 RNA5SP71-201ENST00000362967 126 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 IGKV6D-41-201ENST00000390271 371 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
MTHFRP42898 MIR1184-2-201ENST00000408263 99 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 MIR1184-1-201ENST00000408606 99 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 MIR1184-3-201ENST00000408676 99 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 LINC02470-201ENST00000412084 979 ntTSL 2 BASIC9.32□□□□□ -0.92
MTHFRP42898 CLCN3P1-201ENST00000423965 1017 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 AL441963.1-201ENST00000435137 792 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 PRSS37-203ENST00000438520 826 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 LYPD6B-207ENST00000450639 484 ntAPPRIS ALT2 TSL 3 BASIC9.32□□□□□ -0.92
MTHFRP42898 OR10J8P-201ENST00000504659 929 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 LINC00491-201ENST00000505527 722 ntTSL 3 BASIC9.32□□□□□ -0.92
MTHFRP42898 SDHC-208ENST00000513009 369 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
MTHFRP42898 PGAM1P8-201ENST00000526979 453 ntBASIC9.32□□□□□ -0.92
MTHFRP42898 AP000873.3-201ENST00000531869 766 ntTSL 5 BASIC9.32□□□□□ -0.92
MTHFRP42898 AP002991.1-201ENST00000539305 574 ntTSL 4 BASIC9.32□□□□□ -0.92
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms