Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 IGKV3-25-201ENST00000523155 253 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PCED1B-AS1-205ENST00000548222 625 ntTSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PCSK6-AS1-201ENST00000558696 639 ntTSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 LGALS9DP-201ENST00000580112 764 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PDLIM1P2-201ENST00000582923 607 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC008649.2-201ENST00000585999 242 ntTSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC020907.2-202ENST00000592174 728 ntTSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC020908.1-201ENST00000598893 280 ntTSL 3 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC007336.2-201ENST00000611626 557 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AL591926.6-201ENST00000617375 415 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 RFPL3-AS1_1.1-201ENST00000617561 88 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 ZNF30-206ENST00000601957 2583 ntTSL 2 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 EEF1A1P7-201ENST00000596811 1394 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 ZNF888-202ENST00000638862 4195 ntAPPRIS P1 TSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 LRRC37A-202ENST00000393465 4997 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 HMMR-201ENST00000353866 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC100827.3-201ENST00000566291 2155 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 LIPC-203ENST00000414170 2968 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 AC020951.1-201ENST00000624361 2271 ntBASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 BEST3-203ENST00000331471 1506 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 PRR11-201ENST00000262293 2332 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 MCTP1-201ENST00000312216 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 SEZ6L-204ENST00000402979 3306 ntAPPRIS ALT2 TSL 1 (best) BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 RNF212B-202ENST00000399910 1670 ntAPPRIS P2 TSL 5 BASIC8.18□□□□□ -1.1
NPIPA3F8WFD2 CDC27-204ENST00000527547 2579 ntAPPRIS ALT1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LINC01299-201ENST00000520902 2634 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LRRC37A6P-202ENST00000448648 5444 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 PTPRA-204ENST00000380393 3636 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 FADS1-211ENST00000536991 2701 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CTNNA2-203ENST00000402739 3684 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LCA5-203ENST00000467898 2894 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 ATG2B-202ENST00000359933 13684 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SLC22A24-203ENST00000612278 2101 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 ITPRIPL1-201ENST00000361124 4295 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AL451074.2-201ENST00000423121 2150 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 GRIK2-207ENST00000421544 4789 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 TTC28-208ENST00000612946 11274 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 PLA2G2C-201ENST00000247992 453 ntAPPRIS P5 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 OR10K1-201ENST00000289451 1073 ntAPPRIS P1 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 TFF1-201ENST00000291527 551 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 C12orf54-201ENST00000314014 887 ntAPPRIS P1 TSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 UBXN8-202ENST00000341403 1202 ntTSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 RAB19-201ENST00000356407 822 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 C4BPB-203ENST00000367078 978 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CYP2C58P-201ENST00000436281 475 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LLPHP2-201ENST00000436405 396 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SNX18P2-201ENST00000438540 808 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SLC39A12-AS1-202ENST00000445287 1006 ntTSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 HSPA8P3-201ENST00000449300 780 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 ZNF90P3-201ENST00000450345 1192 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 RPSAP64-201ENST00000451820 336 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 GAPDHP50-201ENST00000464421 993 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 RPL12P8-201ENST00000482081 580 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC107074.1-201ENST00000513617 764 ntTSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC104117.2-201ENST00000523735 515 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AP000916.2-201ENST00000528904 286 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC107884.1-203ENST00000530846 628 ntTSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 RAB19-203ENST00000537763 952 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC015818.2-201ENST00000563569 840 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC026458.2-201ENST00000589323 531 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AL121830.1-203ENST00000598694 701 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 HSP90AB2P-202ENST00000602906 1277 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 Metazoa_SRP.126-201ENST00000618354 266 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 FOLR2-210ENST00000619261 1126 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC005691.1-201ENST00000624723 401 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LINC01002-228ENST00000633402 565 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CCDC113-202ENST00000443128 5110 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 PTPRB-208ENST00000550358 6583 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SLMAP-219ENST00000494088 1305 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SVEP1-202ENST00000374469 12194 ntAPPRIS P2 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SOX5-203ENST00000396007 1379 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SLMAP-220ENST00000495364 1383 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SPATA22-209ENST00000572969 1399 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 SPATA31E3P-201ENST00000613133 4214 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CEACAM5-201ENST00000221992 2874 ntAPPRIS P3 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CDH26-202ENST00000348616 3182 ntAPPRIS P1 TSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 TDG-202ENST00000392872 3251 ntAPPRIS P2 TSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 LINC01138-210ENST00000640832 1709 ntTSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 TNIP3-203ENST00000507879 1778 ntAPPRIS ALT2 TSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 C10orf126-202ENST00000614533 1968 ntAPPRIS P1 TSL 5 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CEP63-201ENST00000332047 2056 ntTSL 1 (best) BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 PART1-202ENST00000506884 2068 ntTSL 2 BASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 AC245060.6-201ENST00000624350 8420 ntBASIC8.17□□□□□ -1.1
NPIPA3F8WFD2 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 KLC1-204ENST00000348520 15091 ntTSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 METTL14-201ENST00000388822 6669 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 IGFN1-202ENST00000335211 11810 ntAPPRIS P2 TSL 5 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 KIF6-202ENST00000287152 9082 ntAPPRIS P1 TSL 2 BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 SLC39A9-202ENST00000336643 3560 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.1
NPIPA3F8WFD2 TGIF1-203ENST00000345133 1088 ntTSL 3 BASIC8.16□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 199.1 ms