RNA–Protein interactions for RNA: ENST00000443128.6

CCDC113-202, Transcript of coiled-coil domain containing 113, humanhuman

TSL 2 BASIC

Gene CCDC113, Length 5,110 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-202ENST00000443128 NISCHQ9Y2I1 1504 aa16.58■□□□□ 0.24
CCDC113-202ENST00000443128 DCAF8L2P0C7V8 631 aa15.76■□□□□ 0.11
CCDC113-202ENST00000443128 SHROOM4Q9ULL8 1493 aa15.01□□□□□ -0.01
CCDC113-202ENST00000443128 SUPT5HO00267 1087 aaKnown RBP14.96□□□□□ -0.02
CCDC113-202ENST00000443128 EHMT2Q96KQ7 1210 aa14.2□□□□□ -0.14
CCDC113-202ENST00000443128 ABCC9O60706 1549 aa14.13□□□□□ -0.15
CCDC113-202ENST00000443128 FAM9AQ8IZU1 332 aaPredicted RBP14.01□□□□□ -0.17
CCDC113-202ENST00000443128 TRIM41Q8WV44 630 aa13.9□□□□□ -0.18
CCDC113-202ENST00000443128 CCDC180Q9P1Z9 1646 aa13.86□□□□□ -0.19
CCDC113-202ENST00000443128 ZCCHC6Q5VYS8 1495 aaKnown RBP13.79□□□□□ -0.2
CCDC113-202ENST00000443128 APLP2Q06481 763 aa13.75□□□□□ -0.21
CCDC113-202ENST00000443128 PABPN1Q86U42 306 aaKnown RBP eCLIP13.74□□□□□ -0.21
CCDC113-202ENST00000443128 TTBK1Q5TCY1 1321 aaPredicted RBP13.66□□□□□ -0.22
CCDC113-202ENST00000443128 RANGAP1P46060 587 aaPredicted RBP13.66□□□□□ -0.22
CCDC113-202ENST00000443128 PCGF6Q9BYE7 350 aa13.64□□□□□ -0.23
CCDC113-202ENST00000443128 CHIC1Q5VXU3 224 aa13.6□□□□□ -0.23
CCDC113-202ENST00000443128 UBTFP17480 764 aaKnown RBP13.59□□□□□ -0.23
CCDC113-202ENST00000443128 SCRIBQ14160 1630 aa13.48□□□□□ -0.25
CCDC113-202ENST00000443128 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
CCDC113-202ENST00000443128 ATP1B4Q9UN42 357 aaPredicted RBP13.43□□□□□ -0.26
CCDC113-202ENST00000443128 PPARGC1BQ86YN6 1023 aaKnown RBP13.36□□□□□ -0.27
CCDC113-202ENST00000443128 CCER1Q8TC90 406 aaPredicted RBP13.29□□□□□ -0.28
CCDC113-202ENST00000443128 DCAF1Q9Y4B6 1507 aa13.29□□□□□ -0.28
CCDC113-202ENST00000443128 NACADO15069 1562 aa13.28□□□□□ -0.28
CCDC113-202ENST00000443128 RB1CC1Q8TDY2 1594 aa13.27□□□□□ -0.29
CCDC113-202ENST00000443128 TRIM26Q12899 539 aaPredicted RBP13.23□□□□□ -0.29
CCDC113-202ENST00000443128 ZEB1P37275 1124 aaPredicted RBP13.23□□□□□ -0.29
CCDC113-202ENST00000443128 RSF1Q96T23 1441 aaPredicted RBP13.12□□□□□ -0.31
CCDC113-202ENST00000443128 CECR2Q9BXF3 1484 aa13.12□□□□□ -0.31
CCDC113-202ENST00000443128 ITGAEP38570 1179 aa13.04□□□□□ -0.32
CCDC113-202ENST00000443128 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.04□□□□□ -0.32
CCDC113-202ENST00000443128 HNRNPUL2Q1KMD3 747 aaKnown RBP13.04□□□□□ -0.32
CCDC113-202ENST00000443128 MYO15BQ96JP2 1530 aa13.02□□□□□ -0.32
CCDC113-202ENST00000443128 HRCP23327 699 aa12.98□□□□□ -0.33
CCDC113-202ENST00000443128 CSRNP3Q8WYN3 585 aa12.97□□□□□ -0.33
CCDC113-202ENST00000443128 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
CCDC113-202ENST00000443128 BAZ1AQ9NRL2 1556 aaPredicted RBP12.85□□□□□ -0.35
CCDC113-202ENST00000443128 FBLN2P98095 1184 aa12.84□□□□□ -0.35
CCDC113-202ENST00000443128 CENPBP07199 599 aaPredicted RBP12.82□□□□□ -0.36
CCDC113-202ENST00000443128 PELP1Q8IZL8 1130 aaKnown RBP12.82□□□□□ -0.36
CCDC113-202ENST00000443128 FAM50AQ14320 339 aaKnown RBP12.81□□□□□ -0.36
CCDC113-202ENST00000443128 BAZ1BQ9UIG0 1483 aaKnown RBP12.81□□□□□ -0.36
CCDC113-202ENST00000443128 MYT1LQ9UL68 1186 aa12.8□□□□□ -0.36
CCDC113-202ENST00000443128 P3H3Q8IVL6 736 aa12.79□□□□□ -0.36
CCDC113-202ENST00000443128 YTHDC1Q96MU7 727 aaKnown RBP12.74□□□□□ -0.37
CCDC113-202ENST00000443128 WIZO95785 1651 aa12.71□□□□□ -0.38
CCDC113-202ENST00000443128 WRNQ14191 1432 aaPredicted RBP eCLIP12.68□□□□□ -0.38
CCDC113-202ENST00000443128 ARID3CA6NKF2 412 aa12.68□□□□□ -0.38
CCDC113-202ENST00000443128 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
CCDC113-202ENST00000443128 TRIM52Q96A61 297 aa12.63□□□□□ -0.39
CCDC113-202ENST00000443128 ATAD2BQ9ULI0 1458 aa12.61□□□□□ -0.39
CCDC113-202ENST00000443128 EEA1Q15075 1411 aa12.6□□□□□ -0.39
CCDC113-202ENST00000443128 POLR3GLQ9BT43 218 aa12.6□□□□□ -0.39
CCDC113-202ENST00000443128 SMARCA4P51532 1647 aa12.59□□□□□ -0.39
CCDC113-202ENST00000443128 NEUROD1Q13562 356 aa12.59□□□□□ -0.39
CCDC113-202ENST00000443128 CLIP1P30622 1438 aa12.56□□□□□ -0.4
CCDC113-202ENST00000443128 GOLGA3Q08378 1498 aa12.55□□□□□ -0.4
CCDC113-202ENST00000443128 SMARCA2P51531 1590 aa12.54□□□□□ -0.4
CCDC113-202ENST00000443128 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
CCDC113-202ENST00000443128 CEP162Q5TB80 1403 aa12.52□□□□□ -0.4
CCDC113-202ENST00000443128 CDK11AQ9UQ88 783 aaPredicted RBP12.52□□□□□ -0.41
CCDC113-202ENST00000443128 TOP2AP11388 1531 aaKnown RBP12.52□□□□□ -0.41
CCDC113-202ENST00000443128 KIF27Q86VH2 1401 aa12.51□□□□□ -0.41
CCDC113-202ENST00000443128 BICRAQ9NZM4 1560 aa12.51□□□□□ -0.41
CCDC113-202ENST00000443128 NEFLP07196 543 aa12.5□□□□□ -0.41
CCDC113-202ENST00000443128 ABCC8Q09428 1581 aa12.5□□□□□ -0.41
CCDC113-202ENST00000443128 ZNF777Q9ULD5 760 aaPredicted RBP12.49□□□□□ -0.41
CCDC113-202ENST00000443128 CNGB1Q14028 1251 aaPredicted RBP12.49□□□□□ -0.41
CCDC113-202ENST00000443128 CHMP7Q8WUX9 453 aaPredicted RBP12.48□□□□□ -0.41
CCDC113-202ENST00000443128 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
CCDC113-202ENST00000443128 SOGA1O94964 1423 aa12.47□□□□□ -0.41
CCDC113-202ENST00000443128 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
CCDC113-202ENST00000443128 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
CCDC113-202ENST00000443128 DNAJC5BQ9UF47 199 aa12.42□□□□□ -0.42
CCDC113-202ENST00000443128 ZNF326Q5BKZ1 582 aaKnown RBP12.41□□□□□ -0.42
CCDC113-202ENST00000443128 CADPSQ9ULU8 1353 aa12.4□□□□□ -0.42
CCDC113-202ENST00000443128 ERCC6Q03468 1493 aa12.4□□□□□ -0.42
CCDC113-202ENST00000443128 MTUS2Q5JR59 1369 aa12.4□□□□□ -0.42
CCDC113-202ENST00000443128 CUX2O14529 1486 aa12.38□□□□□ -0.43
CCDC113-202ENST00000443128 ZNF316A6NFI3 1004 aaPredicted RBP12.38□□□□□ -0.43
CCDC113-202ENST00000443128 NCAPD3P42695 1498 aa12.38□□□□□ -0.43
CCDC113-202ENST00000443128 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
CCDC113-202ENST00000443128 CHIC2Q9UKJ5 165 aa12.34□□□□□ -0.43
CCDC113-202ENST00000443128 CARMIL1Q5VZK9 1371 aa12.33□□□□□ -0.44
CCDC113-202ENST00000443128 SLC4A1APQ9BWU0 796 aaKnown RBP12.33□□□□□ -0.44
CCDC113-202ENST00000443128 PDS5BQ9NTI5 1447 aa12.3□□□□□ -0.44
CCDC113-202ENST00000443128 RUSC2Q8N2Y8 1516 aa12.3□□□□□ -0.44
CCDC113-202ENST00000443128 NPM1P06748 294 aaKnown RBP eCLIP12.3□□□□□ -0.44
CCDC113-202ENST00000443128 TDRD9Q8NDG6 1382 aaKnown RBP12.28□□□□□ -0.44
CCDC113-202ENST00000443128 TONSLQ96HA7 1378 aa12.27□□□□□ -0.45
CCDC113-202ENST00000443128 ANP32CO43423 234 aa12.26□□□□□ -0.45
CCDC113-202ENST00000443128 CC2D2AQ9P2K1 1620 aa12.24□□□□□ -0.45
CCDC113-202ENST00000443128 ERICH6Q7L0X2 663 aa12.24□□□□□ -0.45
CCDC113-202ENST00000443128 TSPY4P0CV99 314 aa12.23□□□□□ -0.45
CCDC113-202ENST00000443128 TSPY10P0CW01 314 aa12.23□□□□□ -0.45
CCDC113-202ENST00000443128 PLEKHD1A6NEE1 506 aa12.22□□□□□ -0.45
CCDC113-202ENST00000443128 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
CCDC113-202ENST00000443128 RRP7BPQ9NSQ0 103 aa12.21□□□□□ -0.45
CCDC113-202ENST00000443128 NESP48681 1621 aa12.21□□□□□ -0.46
CCDC113-202ENST00000443128 FHAD1B1AJZ9 1412 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms