Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PLK5-205ENST00000642079 1969 ntBASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC01558Q9Y6Z2 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 C1QTNF5-202ENST00000528368 1356 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 AC009053.2-201ENST00000563701 2365 ntBASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 MKRN4P-201ENST00000444706 1521 ntBASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC01558Q9Y6Z2 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 TCF3P1-201ENST00000423021 1937 ntBASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 RPS2-210ENST00000530225 765 ntTSL 2 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 AP004607.7-201ENST00000527152 1677 ntBASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC10.65□□□□□ -0.7
LINC01558Q9Y6Z2 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC10.65□□□□□ -0.71
LINC01558Q9Y6Z2 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC10.64□□□□□ -0.71
LINC01558Q9Y6Z2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms