Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC25.16■■□□□ 1.62
TNFRSF11AQ9Y6Q6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC25.16■■□□□ 1.62
TNFRSF11AQ9Y6Q6 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
TNFRSF11AQ9Y6Q6 AC105020.6-201ENST00000621523 1217 ntBASIC25.16■■□□□ 1.62
TNFRSF11AQ9Y6Q6 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
TNFRSF11AQ9Y6Q6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
TNFRSF11AQ9Y6Q6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 MIR2861-201ENST00000636310 90 ntBASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
TNFRSF11AQ9Y6Q6 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 USP48-205ENST00000421625 2818 ntTSL 2 BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC25.14■■□□□ 1.62
TNFRSF11AQ9Y6Q6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.14■■□□□ 1.61
TNFRSF11AQ9Y6Q6 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AC006128.1-201ENST00000624704 1661 ntBASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC25.13■■□□□ 1.61
TNFRSF11AQ9Y6Q6 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AL356652.1-201ENST00000615962 565 ntBASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 STK25-205ENST00000405883 1904 ntTSL 2 BASIC25.12■■□□□ 1.61
TNFRSF11AQ9Y6Q6 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 NME6-213ENST00000451657 871 ntTSL 2 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 CD99P1-205ENST00000527459 561 ntBASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
TNFRSF11AQ9Y6Q6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AC097658.1-201ENST00000475555 843 ntBASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 AL589743.5-201ENST00000616611 1050 ntBASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC25.1■■□□□ 1.61
TNFRSF11AQ9Y6Q6 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC25.09■■□□□ 1.61
TNFRSF11AQ9Y6Q6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC25.09■■□□□ 1.61
TNFRSF11AQ9Y6Q6 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TNFRSF11AQ9Y6Q6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
TNFRSF11AQ9Y6Q6 FP700111.2-201ENST00000619190 1892 ntBASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 16.4 ms