Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 Z99916.2-201ENST00000604037 246 ntBASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 AC069544.1-201ENST00000609399 999 ntBASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SNX11Q9Y5W9 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 MIR4497-201ENST00000583208 89 ntBASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 AC105020.6-201ENST00000621523 1217 ntBASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SNX11Q9Y5W9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.29■□□□□ 0.84
SNX11Q9Y5W9 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.28■□□□□ 0.84
SNX11Q9Y5W9 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 POM121L13P-201ENST00000422362 380 ntBASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SNX11Q9Y5W9 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX11Q9Y5W9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.27■□□□□ 0.83
SNX11Q9Y5W9 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX11Q9Y5W9 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SNX11Q9Y5W9 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.27■□□□□ 0.83
SNX11Q9Y5W9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.27■□□□□ 0.83
SNX11Q9Y5W9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SNX11Q9Y5W9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms