Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
RTCBQ9Y3I0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 TMPOP1-202ENST00000424642 1267 ntBASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 AP003071.4-201ENST00000562276 1284 ntBASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RTCBQ9Y3I0 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
RTCBQ9Y3I0 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 SAPCD2P4-201ENST00000424595 1171 ntBASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC26.01■■□□□ 1.75
RTCBQ9Y3I0 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTCBQ9Y3I0 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
RTCBQ9Y3I0 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC26■■□□□ 1.75
RTCBQ9Y3I0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTCBQ9Y3I0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC26■■□□□ 1.75
RTCBQ9Y3I0 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RTCBQ9Y3I0 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC26■■□□□ 1.75
RTCBQ9Y3I0 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC26■■□□□ 1.75
RTCBQ9Y3I0 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC26■■□□□ 1.75
RTCBQ9Y3I0 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC26■■□□□ 1.75
RTCBQ9Y3I0 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 C1orf229-201ENST00000623686 2258 ntBASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 RN7SL850P-201ENST00000579959 291 ntBASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RTCBQ9Y3I0 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 MMP23A-201ENST00000234610 1017 ntBASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 AL355355.2-201ENST00000442321 338 ntBASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
RTCBQ9Y3I0 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RTCBQ9Y3I0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 AF186192.3-201ENST00000583427 947 ntBASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.96■■□□□ 1.75
RTCBQ9Y3I0 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
RTCBQ9Y3I0 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC25.95■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms