Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 CYP21A1P-202ENST00000354927 1481 ntBASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 AC116050.2-201ENST00000612102 1779 ntBASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
SSX2IPQ9Y2D8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SSX2IPQ9Y2D8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SSX2IPQ9Y2D8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.11
SSX2IPQ9Y2D8 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
SSX2IPQ9Y2D8 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.95■■□□□ 1.11
SSX2IPQ9Y2D8 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 OR2A1-AS1-207ENST00000486094 819 ntBASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 AC105020.6-201ENST00000621523 1217 ntBASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 AL359736.2-201ENST00000621992 437 ntBASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SSX2IPQ9Y2D8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.94■■□□□ 1.1
SSX2IPQ9Y2D8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.94■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms