Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 ABHD17AP1-201ENST00000358206 933 ntBASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 MIR4651-201ENST00000582622 73 ntBASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
UBQLN1Q9UMX0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 TSPY20P-201ENST00000450910 630 ntBASIC22■■□□□ 1.11
UBQLN1Q9UMX0 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 MIR2861-201ENST00000636310 90 ntBASIC22■■□□□ 1.11
UBQLN1Q9UMX0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
UBQLN1Q9UMX0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 C2orf69P4-201ENST00000565394 541 ntBASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 HLA-B-256ENST00000639848 1089 ntBASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
UBQLN1Q9UMX0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 AC060766.5-201ENST00000590539 871 ntBASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
UBQLN1Q9UMX0 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 PLK5-205ENST00000642079 1969 ntBASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 ERF-202ENST00000440177 2032 ntTSL 2 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.97■■□□□ 1.11
UBQLN1Q9UMX0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 GAS7-202ENST00000396115 929 ntTSL 5 BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC21.96■■□□□ 1.11
UBQLN1Q9UMX0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21.96■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms