Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC21.1■□□□□ 0.97
PRDM4Q9UKN5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 OXCT2P1-201ENST00000447263 1535 ntBASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 AC144652.1-201ENST00000609974 1624 ntBASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 AC009113.1-201ENST00000570267 2443 ntBASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 CICP6-201ENST00000457191 2729 ntBASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PRDM4Q9UKN5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PRDM4Q9UKN5 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRDM4Q9UKN5 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
PRDM4Q9UKN5 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRDM4Q9UKN5 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PRDM4Q9UKN5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC21.08■□□□□ 0.96
PRDM4Q9UKN5 AC018695.7-201ENST00000624587 2492 ntBASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 AL162727.3-201ENST00000635661 2787 ntBASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 AC020907.5-201ENST00000624372 1936 ntBASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC21.07■□□□□ 0.96
PRDM4Q9UKN5 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PRDM4Q9UKN5 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms