Protein–RNA interactions for Protein: Q9P2I0

CPSF2, Cleavage and polyadenylation specificity factor subunit 2, humanhuman

Known RBP Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2Q9P2I0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.54■□□□□ 0.88
CPSF2Q9P2I0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 AC027702.1-201ENST00000563810 1770 ntBASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CPSF2Q9P2I0 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 AL136967.2-201ENST00000623968 743 ntBASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CPSF2Q9P2I0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
CPSF2Q9P2I0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.52■□□□□ 0.87
CPSF2Q9P2I0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 AC007225.1-201ENST00000566331 1836 ntBASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 AL031432.3-201ENST00000607698 485 ntBASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CPSF2Q9P2I0 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CPSF2Q9P2I0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CPSF2Q9P2I0 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CPSF2Q9P2I0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms