Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 AC133552.2-202ENST00000575694 574 ntBASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 OR10C1-204ENST00000622521 1039 ntBASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
KCMF1Q9P0J7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 AC007225.1-201ENST00000566331 1836 ntBASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 MIR663A-201ENST00000385250 93 ntBASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 AC069236.1-201ENST00000604339 616 ntBASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
KCMF1Q9P0J7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 AL512625.2-201ENST00000417533 625 ntBASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 HLA-L-209ENST00000420110 1011 ntBASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 AC100791.3-201ENST00000617619 330 ntBASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 MIR2861-201ENST00000636310 90 ntBASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
KCMF1Q9P0J7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 AC008694.1-202ENST00000636953 945 ntBASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
KCMF1Q9P0J7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 FP700111.2-201ENST00000619190 1892 ntBASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 CYP21A1P-202ENST00000354927 1481 ntBASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.34■□□□□ 0.69
KCMF1Q9P0J7 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms