Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 TESC-206ENST00000541210 936 ntTSL 3 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L2-201ENST00000561772 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L6-201ENST00000626483 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L1-201ENST00000627662 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L8-201ENST00000629013 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L3-201ENST00000630187 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L7-201ENST00000630678 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 DUX4L5-201ENST00000630834 1275 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 RARRES2P11-201ENST00000635158 484 ntBASIC19.04■□□□□ 0.64
RLIMQ9NVW2 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RLIMQ9NVW2 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.03■□□□□ 0.64
RLIMQ9NVW2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 AC120498.10-201ENST00000621827 505 ntBASIC19.02■□□□□ 0.64
RLIMQ9NVW2 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RLIMQ9NVW2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RLIMQ9NVW2 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RLIMQ9NVW2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RLIMQ9NVW2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RLIMQ9NVW2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
RLIMQ9NVW2 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.01■□□□□ 0.63
RLIMQ9NVW2 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19■□□□□ 0.63
RLIMQ9NVW2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19■□□□□ 0.63
RLIMQ9NVW2 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19■□□□□ 0.63
RLIMQ9NVW2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
RLIMQ9NVW2 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19■□□□□ 0.63
RLIMQ9NVW2 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms