Protein–RNA interactions for Protein: Q9H7C4

SYNC, Syncoilin, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCQ9H7C4 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.75■■□□□ 1.07
SYNCQ9H7C4 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 AC007322.3-201ENST00000426526 701 ntBASIC21.75■■□□□ 1.07
SYNCQ9H7C4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
SYNCQ9H7C4 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 AL137784.2-201ENST00000607332 1000 ntBASIC21.74■■□□□ 1.07
SYNCQ9H7C4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
SYNCQ9H7C4 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 AL591742.1-201ENST00000604433 565 ntBASIC21.73■■□□□ 1.07
SYNCQ9H7C4 IKBKGP1-201ENST00000612193 1073 ntBASIC21.73■■□□□ 1.07
SYNCQ9H7C4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
SYNCQ9H7C4 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 FP700111.2-201ENST00000619190 1892 ntBASIC21.72■■□□□ 1.07
SYNCQ9H7C4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SYNCQ9H7C4 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SYNCQ9H7C4 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms