Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC31.06■■■□□ 2.56
PTPN23Q9H3S7 AL049796.1-201ENST00000565336 1766 ntBASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC31.05■■■□□ 2.56
PTPN23Q9H3S7 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC31.04■■■□□ 2.56
PTPN23Q9H3S7 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 GGT1-206ENST00000404223 952 ntTSL 2 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 AC005829.2-201ENST00000571422 1056 ntBASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 AC027702.1-201ENST00000563810 1770 ntBASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC31.03■■■□□ 2.56
PTPN23Q9H3S7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC31.02■■■□□ 2.56
PTPN23Q9H3S7 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
PTPN23Q9H3S7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC31.01■■■□□ 2.56
PTPN23Q9H3S7 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.01■■■□□ 2.56
PTPN23Q9H3S7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 KRT17P3-201ENST00000420566 1262 ntBASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 C1QBPP2-201ENST00000528754 825 ntBASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC31.01■■■□□ 2.55
PTPN23Q9H3S7 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
PTPN23Q9H3S7 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC31■■■□□ 2.55
PTPN23Q9H3S7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC31■■■□□ 2.55
PTPN23Q9H3S7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PTPN23Q9H3S7 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
PTPN23Q9H3S7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC31■■■□□ 2.55
PTPN23Q9H3S7 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC31■■■□□ 2.55
PTPN23Q9H3S7 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
PTPN23Q9H3S7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC31■■■□□ 2.55
PTPN23Q9H3S7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC31■■■□□ 2.55
PTPN23Q9H3S7 KRT8P36-201ENST00000489121 1440 ntBASIC30.99■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms