Protein–RNA interactions for Protein: Q9H2W1

MS4A6A, Membrane-spanning 4-domains subfamily A member 6A, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A6AQ9H2W1 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 SLC7A5P2-201ENST00000553010 536 ntBASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
MS4A6AQ9H2W1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC15.71■□□□□ 0.1
MS4A6AQ9H2W1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
MS4A6AQ9H2W1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
MS4A6AQ9H2W1 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 MIR935-201ENST00000401179 91 ntBASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 KRT18P5-201ENST00000436075 1291 ntBASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
MS4A6AQ9H2W1 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC15.69■□□□□ 0.1
MS4A6AQ9H2W1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 AL020996.1-203ENST00000536896 2307 ntBASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
MS4A6AQ9H2W1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms