Protein–RNA interactions for Protein: Q9H089

LSG1, Large subunit GTPase 1 homolog, humanhuman

Known RBP Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1Q9H089 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
LSG1Q9H089 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
LSG1Q9H089 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC24.51■■□□□ 1.51
LSG1Q9H089 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC24.51■■□□□ 1.51
LSG1Q9H089 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 CDV3P1-201ENST00000471403 739 ntBASIC24.51■■□□□ 1.51
LSG1Q9H089 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 AL591742.1-201ENST00000604433 565 ntBASIC24.51■■□□□ 1.51
LSG1Q9H089 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC24.51■■□□□ 1.51
LSG1Q9H089 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.51■■□□□ 1.51
LSG1Q9H089 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC24.51■■□□□ 1.51
LSG1Q9H089 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC24.51■■□□□ 1.51
LSG1Q9H089 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
LSG1Q9H089 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC24.51■■□□□ 1.51
LSG1Q9H089 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC24.51■■□□□ 1.51
LSG1Q9H089 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC24.5■■□□□ 1.51
LSG1Q9H089 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSG1Q9H089 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LSG1Q9H089 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.5■■□□□ 1.51
LSG1Q9H089 AC016769.1-201ENST00000409132 1010 ntBASIC24.5■■□□□ 1.51
LSG1Q9H089 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LSG1Q9H089 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.5■■□□□ 1.51
LSG1Q9H089 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.5■■□□□ 1.51
LSG1Q9H089 FAM21FP-204ENST00000608637 956 ntBASIC24.5■■□□□ 1.51
LSG1Q9H089 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC24.5■■□□□ 1.51
LSG1Q9H089 AC013268.1-206ENST00000638368 961 ntBASIC24.5■■□□□ 1.51
LSG1Q9H089 AC112229.1-201ENST00000639295 961 ntBASIC24.5■■□□□ 1.51
LSG1Q9H089 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSG1Q9H089 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC24.5■■□□□ 1.51
LSG1Q9H089 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
LSG1Q9H089 KRT8P36-201ENST00000489121 1440 ntBASIC24.5■■□□□ 1.51
LSG1Q9H089 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
LSG1Q9H089 AC092720.2-201ENST00000602388 1665 ntBASIC24.5■■□□□ 1.51
LSG1Q9H089 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSG1Q9H089 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC24.49■■□□□ 1.51
LSG1Q9H089 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC24.49■■□□□ 1.51
LSG1Q9H089 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.49■■□□□ 1.51
LSG1Q9H089 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSG1Q9H089 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.49■■□□□ 1.51
LSG1Q9H089 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSG1Q9H089 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
LSG1Q9H089 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.49■■□□□ 1.51
LSG1Q9H089 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.49■■□□□ 1.51
LSG1Q9H089 AC022517.1-201ENST00000592429 346 ntBASIC24.49■■□□□ 1.51
LSG1Q9H089 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSG1Q9H089 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC24.49■■□□□ 1.51
LSG1Q9H089 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
LSG1Q9H089 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 SLC25A24-204ENST00000569674 2357 ntBASIC24.48■■□□□ 1.51
LSG1Q9H089 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC24.48■■□□□ 1.51
LSG1Q9H089 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC24.48■■□□□ 1.51
LSG1Q9H089 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC24.48■■□□□ 1.51
LSG1Q9H089 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC24.47■■□□□ 1.51
LSG1Q9H089 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC24.47■■□□□ 1.51
LSG1Q9H089 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
LSG1Q9H089 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LSG1Q9H089 AC068338.2-201ENST00000563278 1430 ntBASIC24.47■■□□□ 1.51
LSG1Q9H089 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.47■■□□□ 1.51
LSG1Q9H089 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC24.47■■□□□ 1.51
LSG1Q9H089 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.47■■□□□ 1.51
LSG1Q9H089 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC24.47■■□□□ 1.51
LSG1Q9H089 AL162412.1-201ENST00000567129 965 ntBASIC24.47■■□□□ 1.51
LSG1Q9H089 AC092437.1-201ENST00000624794 1048 ntBASIC24.47■■□□□ 1.51
LSG1Q9H089 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LSG1Q9H089 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC24.47■■□□□ 1.51
LSG1Q9H089 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
LSG1Q9H089 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC24.47■■□□□ 1.51
LSG1Q9H089 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
LSG1Q9H089 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC24.47■■□□□ 1.51
LSG1Q9H089 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC24.47■■□□□ 1.51
LSG1Q9H089 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LSG1Q9H089 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC24.46■■□□□ 1.51
LSG1Q9H089 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC24.46■■□□□ 1.51
LSG1Q9H089 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LSG1Q9H089 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.46■■□□□ 1.51
LSG1Q9H089 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LSG1Q9H089 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC24.46■■□□□ 1.51
LSG1Q9H089 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
LSG1Q9H089 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC24.46■■□□□ 1.51
LSG1Q9H089 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC24.46■■□□□ 1.51
LSG1Q9H089 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LSG1Q9H089 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LSG1Q9H089 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.51
LSG1Q9H089 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
LSG1Q9H089 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC24.45■■□□□ 1.5
LSG1Q9H089 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LSG1Q9H089 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC24.45■■□□□ 1.5
LSG1Q9H089 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC24.45■■□□□ 1.5
LSG1Q9H089 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms