Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 RARRES2P11-201ENST00000635158 484 ntBASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC10.37□□□□□ -0.75
KRTAP3-1Q9BYR8 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 AC024257.2-201ENST00000549699 147 ntBASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 AP000974.1-201ENST00000623909 2387 ntBASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
KRTAP3-1Q9BYR8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 AICDA-202ENST00000537228 667 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 MIR2861-201ENST00000636310 90 ntBASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
KRTAP3-1Q9BYR8 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms