Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.29■□□□□ 0.36
FOXC2Q99958 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
FOXC2Q99958 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
FOXC2Q99958 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.28■□□□□ 0.36
FOXC2Q99958 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 PKD1P6-201ENST00000343738 4769 ntBASIC17.28■□□□□ 0.36
FOXC2Q99958 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.28■□□□□ 0.36
FOXC2Q99958 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 AC005521.1-201ENST00000393351 872 ntBASIC17.28■□□□□ 0.36
FOXC2Q99958 AL390719.1-204ENST00000412397 1219 ntBASIC17.28■□□□□ 0.36
FOXC2Q99958 AL353807.1-201ENST00000427475 662 ntBASIC17.28■□□□□ 0.36
FOXC2Q99958 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXC2Q99958 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.28■□□□□ 0.36
FOXC2Q99958 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXC2Q99958 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.28■□□□□ 0.36
FOXC2Q99958 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXC2Q99958 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.28■□□□□ 0.36
FOXC2Q99958 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.28■□□□□ 0.36
FOXC2Q99958 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXC2Q99958 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.28■□□□□ 0.36
FOXC2Q99958 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXC2Q99958 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.28■□□□□ 0.36
FOXC2Q99958 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
FOXC2Q99958 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.27■□□□□ 0.36
FOXC2Q99958 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXC2Q99958 AC068473.5-201ENST00000616428 2072 ntBASIC17.27■□□□□ 0.36
FOXC2Q99958 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
FOXC2Q99958 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXC2Q99958 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
FOXC2Q99958 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXC2Q99958 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXC2Q99958 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXC2Q99958 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
FOXC2Q99958 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
FOXC2Q99958 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
FOXC2Q99958 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC17.27■□□□□ 0.36
FOXC2Q99958 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
FOXC2Q99958 AC006557.6-201ENST00000623071 864 ntBASIC17.27■□□□□ 0.36
FOXC2Q99958 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXC2Q99958 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
FOXC2Q99958 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXC2Q99958 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
FOXC2Q99958 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
FOXC2Q99958 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXC2Q99958 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXC2Q99958 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
FOXC2Q99958 AC113347.1-201ENST00000413321 391 ntBASIC17.26■□□□□ 0.35
FOXC2Q99958 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.26■□□□□ 0.35
FOXC2Q99958 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXC2Q99958 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.26■□□□□ 0.35
FOXC2Q99958 AF186192.3-201ENST00000583427 947 ntBASIC17.26■□□□□ 0.35
FOXC2Q99958 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
FOXC2Q99958 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.26■□□□□ 0.35
FOXC2Q99958 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
FOXC2Q99958 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXC2Q99958 AC079834.2-201ENST00000609776 1949 ntBASIC17.25■□□□□ 0.35
FOXC2Q99958 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXC2Q99958 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXC2Q99958 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXC2Q99958 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
FOXC2Q99958 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.25■□□□□ 0.35
FOXC2Q99958 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXC2Q99958 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC17.25■□□□□ 0.35
FOXC2Q99958 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXC2Q99958 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
FOXC2Q99958 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
FOXC2Q99958 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.25■□□□□ 0.35
FOXC2Q99958 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC17.25■□□□□ 0.35
FOXC2Q99958 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
FOXC2Q99958 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.24■□□□□ 0.35
FOXC2Q99958 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
FOXC2Q99958 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.24■□□□□ 0.35
FOXC2Q99958 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
FOXC2Q99958 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.24■□□□□ 0.35
FOXC2Q99958 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms