Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
BARD1Q99728 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
BARD1Q99728 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.52■□□□□ 0.72
BARD1Q99728 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
BARD1Q99728 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
BARD1Q99728 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.52■□□□□ 0.72
BARD1Q99728 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
BARD1Q99728 CNN2P6-201ENST00000439038 900 ntBASIC19.52■□□□□ 0.72
BARD1Q99728 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 AP001160.3-201ENST00000601484 763 ntBASIC19.52■□□□□ 0.72
BARD1Q99728 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.52■□□□□ 0.72
BARD1Q99728 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.52■□□□□ 0.72
BARD1Q99728 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
BARD1Q99728 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.52■□□□□ 0.72
BARD1Q99728 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.52■□□□□ 0.71
BARD1Q99728 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BARD1Q99728 AC073314.1-201ENST00000568729 2216 ntBASIC19.52■□□□□ 0.71
BARD1Q99728 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BARD1Q99728 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
BARD1Q99728 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
BARD1Q99728 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.71
BARD1Q99728 PCDHAC2-203ENST00000615316 3011 ntBASIC19.51■□□□□ 0.71
BARD1Q99728 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.51■□□□□ 0.71
BARD1Q99728 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.51■□□□□ 0.71
BARD1Q99728 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
BARD1Q99728 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.51■□□□□ 0.71
BARD1Q99728 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.51■□□□□ 0.71
BARD1Q99728 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
BARD1Q99728 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 AC055733.4-201ENST00000638462 1354 ntBASIC19.5■□□□□ 0.71
BARD1Q99728 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
BARD1Q99728 SLC29A4P1-201ENST00000398760 971 ntBASIC19.5■□□□□ 0.71
BARD1Q99728 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.5■□□□□ 0.71
BARD1Q99728 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.5■□□□□ 0.71
BARD1Q99728 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
BARD1Q99728 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.5■□□□□ 0.71
BARD1Q99728 AC133041.1-202ENST00000642053 222 ntBASIC19.5■□□□□ 0.71
BARD1Q99728 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
BARD1Q99728 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.5■□□□□ 0.71
BARD1Q99728 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
BARD1Q99728 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.49■□□□□ 0.71
BARD1Q99728 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
BARD1Q99728 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
BARD1Q99728 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.49■□□□□ 0.71
BARD1Q99728 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.49■□□□□ 0.71
BARD1Q99728 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
BARD1Q99728 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.49■□□□□ 0.71
BARD1Q99728 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.49■□□□□ 0.71
BARD1Q99728 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
BARD1Q99728 AP005212.1-201ENST00000581547 1997 ntBASIC19.49■□□□□ 0.71
BARD1Q99728 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
BARD1Q99728 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
BARD1Q99728 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
BARD1Q99728 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.48■□□□□ 0.71
BARD1Q99728 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
BARD1Q99728 PLK5-205ENST00000642079 1969 ntBASIC19.48■□□□□ 0.71
BARD1Q99728 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.48■□□□□ 0.71
BARD1Q99728 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
BARD1Q99728 AF201337.1-201ENST00000520239 748 ntBASIC19.48■□□□□ 0.71
BARD1Q99728 KRT18P20-201ENST00000548986 1279 ntBASIC19.48■□□□□ 0.71
BARD1Q99728 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.48■□□□□ 0.71
BARD1Q99728 MIR4651-201ENST00000582622 73 ntBASIC19.48■□□□□ 0.71
BARD1Q99728 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.48■□□□□ 0.71
BARD1Q99728 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.48■□□□□ 0.71
BARD1Q99728 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms