Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
RNF2Q99496 HCG11-201ENST00000411553 5696 ntBASIC16.23■□□□□ 0.19
RNF2Q99496 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.23■□□□□ 0.19
RNF2Q99496 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 MPST-204ENST00000404393 1329 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF2Q99496 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
RNF2Q99496 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
RNF2Q99496 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 AL358852.1-201ENST00000623174 1268 ntBASIC16.22■□□□□ 0.19
RNF2Q99496 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF2Q99496 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.22■□□□□ 0.19
RNF2Q99496 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
RNF2Q99496 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
RNF2Q99496 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
RNF2Q99496 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.22■□□□□ 0.19
RNF2Q99496 AC007225.1-201ENST00000566331 1836 ntBASIC16.22■□□□□ 0.19
RNF2Q99496 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
RNF2Q99496 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF2Q99496 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF2Q99496 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF2Q99496 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF2Q99496 AL020996.1-203ENST00000536896 2307 ntBASIC16.21■□□□□ 0.19
RNF2Q99496 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF2Q99496 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.21■□□□□ 0.19
RNF2Q99496 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
RNF2Q99496 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
RNF2Q99496 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.21■□□□□ 0.19
RNF2Q99496 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF2Q99496 MIR6084-201ENST00000622012 110 ntBASIC16.21■□□□□ 0.19
RNF2Q99496 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.21■□□□□ 0.19
RNF2Q99496 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
RNF2Q99496 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF2Q99496 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
RNF2Q99496 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.21■□□□□ 0.18
RNF2Q99496 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.18
RNF2Q99496 AC009237.3-201ENST00000393279 1427 ntBASIC16.2■□□□□ 0.18
RNF2Q99496 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF2Q99496 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
RNF2Q99496 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.2■□□□□ 0.18
RNF2Q99496 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
RNF2Q99496 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
RNF2Q99496 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.2■□□□□ 0.18
RNF2Q99496 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
RNF2Q99496 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
RNF2Q99496 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
RNF2Q99496 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.19■□□□□ 0.18
RNF2Q99496 ZNRF2P3-201ENST00000424200 374 ntBASIC16.19■□□□□ 0.18
RNF2Q99496 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF2Q99496 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF2Q99496 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.19■□□□□ 0.18
RNF2Q99496 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
RNF2Q99496 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.19■□□□□ 0.18
RNF2Q99496 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF2Q99496 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
RNF2Q99496 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF2Q99496 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
RNF2Q99496 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
RNF2Q99496 AC027702.1-201ENST00000563810 1770 ntBASIC16.18■□□□□ 0.18
RNF2Q99496 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms