Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC137767.1-201ENST00000602918 1920 ntBASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 AC003102.1-202ENST00000563394 1796 ntBASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CSMD1Q96PZ7 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 AC120498.10-201ENST00000621827 505 ntBASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 AL137013.1-201ENST00000432946 1228 ntBASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 RBM17P1-201ENST00000453646 1190 ntBASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 AC079598.2-202ENST00000546624 1451 ntBASIC17.54■□□□□ 0.4
CSMD1Q96PZ7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 FAM21FP-204ENST00000608637 956 ntBASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 AC008175.2-201ENST00000612840 297 ntBASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 BX664615.1-201ENST00000443558 458 ntBASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.53■□□□□ 0.4
CSMD1Q96PZ7 LINC01568-207ENST00000641790 1380 ntBASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 AC104076.2-201ENST00000448912 469 ntBASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CSMD1Q96PZ7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 MCRIP2P1-201ENST00000394346 511 ntBASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
CSMD1Q96PZ7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.51■□□□□ 0.39
CSMD1Q96PZ7 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 KRASP1-201ENST00000407852 552 ntBASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 AL450487.1-201ENST00000426799 995 ntBASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 AC105020.6-201ENST00000621523 1217 ntBASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC17.5■□□□□ 0.39
CSMD1Q96PZ7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms