Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ITCHQ96J02 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ITCHQ96J02 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.46■□□□□ 0.71
ITCHQ96J02 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
ITCHQ96J02 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ITCHQ96J02 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC19.46■□□□□ 0.71
ITCHQ96J02 AC245052.3-201ENST00000450182 901 ntBASIC19.46■□□□□ 0.71
ITCHQ96J02 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.46■□□□□ 0.71
ITCHQ96J02 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ITCHQ96J02 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ITCHQ96J02 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ITCHQ96J02 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ITCHQ96J02 AC099778.1-201ENST00000568593 1911 ntBASIC19.45■□□□□ 0.7
ITCHQ96J02 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
ITCHQ96J02 KRT16P2-201ENST00000414673 1423 ntBASIC19.45■□□□□ 0.7
ITCHQ96J02 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.45■□□□□ 0.7
ITCHQ96J02 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
ITCHQ96J02 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.45■□□□□ 0.7
ITCHQ96J02 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.45■□□□□ 0.7
ITCHQ96J02 AC138907.5-202ENST00000569484 235 ntBASIC19.45■□□□□ 0.7
ITCHQ96J02 AC120498.10-201ENST00000621827 505 ntBASIC19.45■□□□□ 0.7
ITCHQ96J02 RARRES2P11-201ENST00000635158 484 ntBASIC19.45■□□□□ 0.7
ITCHQ96J02 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC19.45■□□□□ 0.7
ITCHQ96J02 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.45■□□□□ 0.7
ITCHQ96J02 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.45■□□□□ 0.7
ITCHQ96J02 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
ITCHQ96J02 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ITCHQ96J02 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.44■□□□□ 0.7
ITCHQ96J02 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.44■□□□□ 0.7
ITCHQ96J02 SUDS3P1-201ENST00000505831 966 ntBASIC19.44■□□□□ 0.7
ITCHQ96J02 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.44■□□□□ 0.7
ITCHQ96J02 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.44■□□□□ 0.7
ITCHQ96J02 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.44■□□□□ 0.7
ITCHQ96J02 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ITCHQ96J02 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ITCHQ96J02 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
ITCHQ96J02 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.43■□□□□ 0.7
ITCHQ96J02 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.43■□□□□ 0.7
ITCHQ96J02 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
ITCHQ96J02 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.43■□□□□ 0.7
ITCHQ96J02 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.43■□□□□ 0.7
ITCHQ96J02 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.43■□□□□ 0.7
ITCHQ96J02 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.43■□□□□ 0.7
ITCHQ96J02 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ITCHQ96J02 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
ITCHQ96J02 AC112907.3-201ENST00000577781 2400 ntBASIC19.42■□□□□ 0.7
ITCHQ96J02 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
ITCHQ96J02 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.42■□□□□ 0.7
ITCHQ96J02 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 MIR6084-201ENST00000622012 110 ntBASIC19.42■□□□□ 0.7
ITCHQ96J02 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
ITCHQ96J02 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ITCHQ96J02 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms