Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
DDX1Q92499 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
DDX1Q92499 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.83■■□□□ 1.09
DDX1Q92499 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX1Q92499 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX1Q92499 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX1Q92499 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX1Q92499 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
DDX1Q92499 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.83■■□□□ 1.09
DDX1Q92499 AC007322.3-201ENST00000426526 701 ntBASIC21.83■■□□□ 1.09
DDX1Q92499 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.83■■□□□ 1.09
DDX1Q92499 MFSD11-216ENST00000590393 1141 ntBASIC21.83■■□□□ 1.09
DDX1Q92499 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.83■■□□□ 1.09
DDX1Q92499 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
DDX1Q92499 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX1Q92499 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX1Q92499 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
DDX1Q92499 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX1Q92499 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
DDX1Q92499 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.83■■□□□ 1.08
DDX1Q92499 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC21.83■■□□□ 1.08
DDX1Q92499 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX1Q92499 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX1Q92499 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX1Q92499 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX1Q92499 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX1Q92499 MIR663A-201ENST00000385250 93 ntBASIC21.82■■□□□ 1.08
DDX1Q92499 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
DDX1Q92499 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX1Q92499 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
DDX1Q92499 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX1Q92499 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
DDX1Q92499 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
DDX1Q92499 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
DDX1Q92499 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC21.82■■□□□ 1.08
DDX1Q92499 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX1Q92499 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.81■■□□□ 1.08
DDX1Q92499 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
DDX1Q92499 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.81■■□□□ 1.08
DDX1Q92499 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
DDX1Q92499 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX1Q92499 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 AL162377.1-201ENST00000618844 1793 ntBASIC21.8■■□□□ 1.08
DDX1Q92499 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC21.8■■□□□ 1.08
DDX1Q92499 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC21.8■■□□□ 1.08
DDX1Q92499 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.8■■□□□ 1.08
DDX1Q92499 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.8■■□□□ 1.08
DDX1Q92499 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
DDX1Q92499 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC21.8■■□□□ 1.08
DDX1Q92499 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.8■■□□□ 1.08
DDX1Q92499 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
DDX1Q92499 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX1Q92499 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 AC007322.4-201ENST00000509611 723 ntBASIC21.79■■□□□ 1.08
DDX1Q92499 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.79■■□□□ 1.08
DDX1Q92499 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.79■■□□□ 1.08
DDX1Q92499 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
DDX1Q92499 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
DDX1Q92499 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
DDX1Q92499 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC21.79■■□□□ 1.08
DDX1Q92499 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC21.79■■□□□ 1.08
DDX1Q92499 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX1Q92499 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX1Q92499 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
DDX1Q92499 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
DDX1Q92499 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.78■■□□□ 1.08
DDX1Q92499 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX1Q92499 DUX4L16-201ENST00000555130 1264 ntBASIC21.78■■□□□ 1.08
DDX1Q92499 ARL16-209ENST00000573715 763 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX1Q92499 ARL16-211ENST00000576135 694 ntTSL 3 BASIC21.78■■□□□ 1.08
DDX1Q92499 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC21.78■■□□□ 1.08
DDX1Q92499 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms