Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 WDR38-203ENST00000618744 1270 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
SPTSSBQ8NFR3 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 LINC01006-201ENST00000333319 2292 ntBASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 KRT18P10-201ENST00000388836 1287 ntBASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC11.24□□□□□ -0.61
SPTSSBQ8NFR3 AC007613.1-201ENST00000572811 2597 ntBASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 AC004408.2-201ENST00000623613 2777 ntBASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 AL032819.2-201ENST00000624543 2162 ntBASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC11.23□□□□□ -0.61
SPTSSBQ8NFR3 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
SPTSSBQ8NFR3 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms