Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 AC012414.1-201ENST00000556676 535 ntBASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 TPRG1LP1-201ENST00000598702 760 ntBASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
BBS1Q8NFJ9 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 RNF165-205ENST00000588679 2904 ntBASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 MIR939-201ENST00000401314 82 ntBASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 RASA4CP-201ENST00000424092 1398 ntBASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.38■□□□□ 0.53
BBS1Q8NFJ9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 EDA-201ENST00000338901 1233 ntBASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 RARRES2P11-201ENST00000635158 484 ntBASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BBS1Q8NFJ9 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BBS1Q8NFJ9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 AC008406.3-201ENST00000620001 1374 ntBASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 AL355001.2-201ENST00000620617 1191 ntBASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BBS1Q8NFJ9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 SMG8-203ENST00000578922 2178 ntBASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BBS1Q8NFJ9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms