Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 KRT87P-202ENST00000534226 1464 ntBASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TMEM116Q8NCL8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.18
TMEM116Q8NCL8 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEM116Q8NCL8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 ZNRF2P3-201ENST00000424200 374 ntBASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 AC079140.4-201ENST00000507448 529 ntBASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 LINC02228-203ENST00000641970 1355 ntBASIC16.13■□□□□ 0.17
TMEM116Q8NCL8 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 KRT16P2-201ENST00000414673 1423 ntBASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 HCG11-201ENST00000411553 5696 ntBASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 AC138907.5-202ENST00000569484 235 ntBASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 AL162377.1-201ENST00000618844 1793 ntBASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEM116Q8NCL8 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms