Protein–RNA interactions for Protein: Q8N813

C3orf56, Putative uncharacterized protein C3orf56, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56Q8N813 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 AC137767.1-201ENST00000602918 1920 ntBASIC16.03■□□□□ 0.16
C3orf56Q8N813 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
C3orf56Q8N813 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC16.03■□□□□ 0.16
C3orf56Q8N813 AC003102.1-202ENST00000563394 1796 ntBASIC16.03■□□□□ 0.16
C3orf56Q8N813 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 CRAT-202ENST00000393384 973 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
C3orf56Q8N813 MIR6786-201ENST00000616843 113 ntBASIC16.02■□□□□ 0.16
C3orf56Q8N813 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C3orf56Q8N813 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C3orf56Q8N813 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C3orf56Q8N813 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C3orf56Q8N813 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
C3orf56Q8N813 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
C3orf56Q8N813 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
C3orf56Q8N813 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
C3orf56Q8N813 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.01■□□□□ 0.15
C3orf56Q8N813 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
C3orf56Q8N813 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC16■□□□□ 0.15
C3orf56Q8N813 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16■□□□□ 0.15
C3orf56Q8N813 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
C3orf56Q8N813 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16■□□□□ 0.15
C3orf56Q8N813 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC16■□□□□ 0.15
C3orf56Q8N813 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
C3orf56Q8N813 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
C3orf56Q8N813 SAPCD2P4-201ENST00000424595 1171 ntBASIC16■□□□□ 0.15
C3orf56Q8N813 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC16■□□□□ 0.15
C3orf56Q8N813 AC005829.2-201ENST00000571422 1056 ntBASIC16■□□□□ 0.15
C3orf56Q8N813 AC145285.6-201ENST00000604632 637 ntBASIC16■□□□□ 0.15
C3orf56Q8N813 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC16■□□□□ 0.15
C3orf56Q8N813 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC16■□□□□ 0.15
C3orf56Q8N813 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
C3orf56Q8N813 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
C3orf56Q8N813 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
C3orf56Q8N813 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.99■□□□□ 0.15
C3orf56Q8N813 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C3orf56Q8N813 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C3orf56Q8N813 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
C3orf56Q8N813 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
C3orf56Q8N813 RER1-204ENST00000378518 522 ntTSL 3 BASIC15.99■□□□□ 0.15
C3orf56Q8N813 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC15.99■□□□□ 0.15
C3orf56Q8N813 AC005521.1-201ENST00000393351 872 ntBASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms