Protein–RNA interactions for Protein: Q8N7B9

EFCAB3, EF-hand calcium-binding domain-containing protein 3, humanhuman

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB3Q8N7B9 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.2■□□□□ 0.82
EFCAB3Q8N7B9 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 AC006015.1-201ENST00000429970 570 ntBASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
EFCAB3Q8N7B9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 AL355802.2-201ENST00000402069 882 ntBASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
EFCAB3Q8N7B9 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 ABHD17AP1-201ENST00000358206 933 ntBASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 CDCA4P2-201ENST00000441182 718 ntBASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 MTND2P7-201ENST00000521337 640 ntBASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 BID-214ENST00000617586 542 ntTSL 5 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.17■□□□□ 0.82
EFCAB3Q8N7B9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 AC006128.1-201ENST00000624704 1661 ntBASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 AC003102.1-202ENST00000563394 1796 ntBASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 TPRG1LP1-201ENST00000598702 760 ntBASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 AC104771.1-201ENST00000603335 964 ntBASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.16■□□□□ 0.82
EFCAB3Q8N7B9 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms