Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
LRRTM1Q86UE6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 AC116562.4-201ENST00000641316 2276 ntBASIC17.73■□□□□ 0.43
LRRTM1Q86UE6 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 AC024257.2-201ENST00000549699 147 ntBASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRTM1Q86UE6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 MPST-208ENST00000628507 698 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRTM1Q86UE6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRTM1Q86UE6 TSPY26P-201ENST00000476365 1326 ntBASIC17.71■□□□□ 0.42
LRRTM1Q86UE6 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRRTM1Q86UE6 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.71■□□□□ 0.42
LRRTM1Q86UE6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRTM1Q86UE6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms