Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 AC087239.1-201ENST00000622671 572 ntBASIC19.29■□□□□ 0.68
LPCAT4Q643R3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 AP006587.3-201ENST00000525742 1516 ntBASIC19.29■□□□□ 0.68
LPCAT4Q643R3 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
LPCAT4Q643R3 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 TSPY13P-201ENST00000338964 914 ntBASIC19.28■□□□□ 0.68
LPCAT4Q643R3 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
LPCAT4Q643R3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 AC092720.2-201ENST00000602388 1665 ntBASIC19.27■□□□□ 0.68
LPCAT4Q643R3 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LPCAT4Q643R3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.67
LPCAT4Q643R3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LPCAT4Q643R3 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LPCAT4Q643R3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 AC093484.2-201ENST00000580996 2166 ntBASIC19.26■□□□□ 0.67
LPCAT4Q643R3 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 TK2-216ENST00000564917 1156 ntTSL 3 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LPCAT4Q643R3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 KRT8P33-201ENST00000508125 1423 ntBASIC19.25■□□□□ 0.67
LPCAT4Q643R3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LPCAT4Q643R3 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LPCAT4Q643R3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms