Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.43■■□□□ 1.5
RNF20Q5VTR2 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
RNF20Q5VTR2 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC24.43■■□□□ 1.5
RNF20Q5VTR2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC24.43■■□□□ 1.5
RNF20Q5VTR2 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 AC007322.4-201ENST00000509611 723 ntBASIC24.42■■□□□ 1.5
RNF20Q5VTR2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 AC092667.1-201ENST00000434301 2586 ntBASIC24.42■■□□□ 1.5
RNF20Q5VTR2 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
RNF20Q5VTR2 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 AL121603.2-201ENST00000557373 2117 ntBASIC24.41■■□□□ 1.5
RNF20Q5VTR2 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 AC006015.1-201ENST00000429970 570 ntBASIC24.41■■□□□ 1.5
RNF20Q5VTR2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 AL162412.1-201ENST00000567129 965 ntBASIC24.41■■□□□ 1.5
RNF20Q5VTR2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 MFSD11-216ENST00000590393 1141 ntBASIC24.41■■□□□ 1.5
RNF20Q5VTR2 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 FAM21FP-204ENST00000608637 956 ntBASIC24.41■■□□□ 1.5
RNF20Q5VTR2 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF20Q5VTR2 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 UQCRFS1P1-201ENST00000435169 820 ntBASIC24.4■■□□□ 1.5
RNF20Q5VTR2 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC24.4■■□□□ 1.5
RNF20Q5VTR2 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF20Q5VTR2 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC24.39■■□□□ 1.5
RNF20Q5VTR2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC24.39■■□□□ 1.5
RNF20Q5VTR2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF20Q5VTR2 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF20Q5VTR2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 AC092720.2-201ENST00000602388 1665 ntBASIC24.37■■□□□ 1.49
RNF20Q5VTR2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF20Q5VTR2 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms