Protein–RNA interactions for Protein: Q5NE16

CTSL3P, Putative inactive cathepsin L-like protein CTSL3P, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL3PQ5NE16 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 AC073130.3-201ENST00000624389 2278 ntBASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.2■□□□□ 0.82
CTSL3PQ5NE16 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CTSL3PQ5NE16 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 AC004911.1-201ENST00000416316 871 ntBASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CTSL3PQ5NE16 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 CYP2T1P-201ENST00000432607 1285 ntBASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 GLI3-203ENST00000437480 451 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 KRT8P36-201ENST00000489121 1440 ntBASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CTSL3PQ5NE16 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 APTR-203ENST00000430801 583 ntTSL 5 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 RARRES2P4-201ENST00000514074 484 ntBASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 AC231657.2-201ENST00000624556 255 ntBASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.16■□□□□ 0.82
CTSL3PQ5NE16 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms