Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 RAP2CP1-202ENST00000605179 643 ntBASIC10.26□□□□□ -0.77
LINC01554Q52M75 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
LINC01554Q52M75 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
LINC01554Q52M75 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PLK5-205ENST00000642079 1969 ntBASIC10.25□□□□□ -0.77
LINC01554Q52M75 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 AL596257.1-201ENST00000641463 2694 ntBASIC10.25□□□□□ -0.77
LINC01554Q52M75 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC10.25□□□□□ -0.77
LINC01554Q52M75 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
LINC01554Q52M75 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 AC090877.2-201ENST00000558441 1738 ntBASIC10.24□□□□□ -0.77
LINC01554Q52M75 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 AC004408.2-201ENST00000623613 2777 ntBASIC10.24□□□□□ -0.77
LINC01554Q52M75 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 AC009831.1-201ENST00000580420 1582 ntBASIC10.24□□□□□ -0.77
LINC01554Q52M75 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC10.24□□□□□ -0.77
LINC01554Q52M75 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
LINC01554Q52M75 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC10.24□□□□□ -0.77
Retrieved 100 of 98,524 protein–RNA pairs in 219.9 ms