Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-1P78426 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
NKX6-1P78426 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
NKX6-1P78426 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
NKX6-1P78426 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.98■□□□□ 0.47
NKX6-1P78426 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.98■□□□□ 0.47
NKX6-1P78426 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
NKX6-1P78426 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX6-1P78426 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.97■□□□□ 0.47
NKX6-1P78426 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.97■□□□□ 0.47
NKX6-1P78426 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NKX6-1P78426 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX6-1P78426 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NKX6-1P78426 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.97■□□□□ 0.47
NKX6-1P78426 AC244015.2-201ENST00000616358 1861 ntBASIC17.97■□□□□ 0.47
NKX6-1P78426 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NKX6-1P78426 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX6-1P78426 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX6-1P78426 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX6-1P78426 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NKX6-1P78426 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX6-1P78426 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.96■□□□□ 0.47
NKX6-1P78426 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX6-1P78426 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX6-1P78426 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX6-1P78426 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
NKX6-1P78426 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.96■□□□□ 0.47
NKX6-1P78426 AC083880.1-201ENST00000608266 535 ntBASIC17.96■□□□□ 0.47
NKX6-1P78426 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.96■□□□□ 0.47
NKX6-1P78426 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.96■□□□□ 0.47
NKX6-1P78426 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NKX6-1P78426 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.96■□□□□ 0.46
NKX6-1P78426 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX6-1P78426 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX6-1P78426 AL596275.1-201ENST00000423464 877 ntBASIC17.95■□□□□ 0.46
NKX6-1P78426 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 AC245052.3-201ENST00000450182 901 ntBASIC17.95■□□□□ 0.46
NKX6-1P78426 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX6-1P78426 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.95■□□□□ 0.46
NKX6-1P78426 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX6-1P78426 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC17.95■□□□□ 0.46
NKX6-1P78426 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX6-1P78426 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX6-1P78426 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.95■□□□□ 0.46
NKX6-1P78426 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.95■□□□□ 0.46
NKX6-1P78426 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
NKX6-1P78426 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.94■□□□□ 0.46
NKX6-1P78426 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX6-1P78426 AC128676.1-201ENST00000454392 318 ntBASIC17.94■□□□□ 0.46
NKX6-1P78426 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.94■□□□□ 0.46
NKX6-1P78426 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.94■□□□□ 0.46
NKX6-1P78426 AL162412.1-201ENST00000567129 965 ntBASIC17.94■□□□□ 0.46
NKX6-1P78426 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.94■□□□□ 0.46
NKX6-1P78426 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NKX6-1P78426 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
NKX6-1P78426 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.93■□□□□ 0.46
NKX6-1P78426 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
NKX6-1P78426 FBXW4P1-201ENST00000426721 2239 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms