Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 PCDHAC2-203ENST00000615316 3011 ntBASIC19.09■□□□□ 0.65
RPS3AP61247 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS3AP61247 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.65
RPS3AP61247 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
RPS3AP61247 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS3AP61247 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS3AP61247 KRT18P11-201ENST00000435214 1283 ntBASIC19.08■□□□□ 0.64
RPS3AP61247 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC19.08■□□□□ 0.64
RPS3AP61247 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
RPS3AP61247 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS3AP61247 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS3AP61247 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
RPS3AP61247 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
RPS3AP61247 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC19.08■□□□□ 0.64
RPS3AP61247 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS3AP61247 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
RPS3AP61247 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.07■□□□□ 0.64
RPS3AP61247 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC19.07■□□□□ 0.64
RPS3AP61247 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.07■□□□□ 0.64
RPS3AP61247 DBI-210ENST00000542275 757 ntTSL 5 BASIC19.07■□□□□ 0.64
RPS3AP61247 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.07■□□□□ 0.64
RPS3AP61247 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
RPS3AP61247 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.07■□□□□ 0.64
RPS3AP61247 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
RPS3AP61247 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
RPS3AP61247 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC19.06■□□□□ 0.64
RPS3AP61247 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC19.06■□□□□ 0.64
RPS3AP61247 KRT18P61-201ENST00000585825 1298 ntBASIC19.06■□□□□ 0.64
RPS3AP61247 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RPS3AP61247 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS3AP61247 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 AC053503.5-201ENST00000601508 636 ntBASIC19.05■□□□□ 0.64
RPS3AP61247 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC19.05■□□□□ 0.64
RPS3AP61247 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.05■□□□□ 0.64
RPS3AP61247 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
RPS3AP61247 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RPS3AP61247 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RPS3AP61247 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS3AP61247 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS3AP61247 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.04■□□□□ 0.64
RPS3AP61247 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 EEF1DP3-203ENST00000566025 782 ntBASIC19.04■□□□□ 0.64
RPS3AP61247 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.04■□□□□ 0.64
RPS3AP61247 AC138907.5-202ENST00000569484 235 ntBASIC19.04■□□□□ 0.64
RPS3AP61247 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC19.04■□□□□ 0.64
RPS3AP61247 AP001160.3-201ENST00000601484 763 ntBASIC19.04■□□□□ 0.64
RPS3AP61247 IKBKGP1-201ENST00000612193 1073 ntBASIC19.04■□□□□ 0.64
RPS3AP61247 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.04■□□□□ 0.64
RPS3AP61247 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RPS3AP61247 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.04■□□□□ 0.64
RPS3AP61247 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms