Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CMC4P56277 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 NXN-202ENST00000537628 1340 ntTSL 3 BASIC15.25■□□□□ 0.03
CMC4P56277 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC15.25■□□□□ 0.03
CMC4P56277 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CMC4P56277 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 CYP2T3P-201ENST00000601990 817 ntBASIC15.25■□□□□ 0.03
CMC4P56277 AL109923.1-201ENST00000618799 583 ntBASIC15.25■□□□□ 0.03
CMC4P56277 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC15.25■□□□□ 0.03
CMC4P56277 AC027702.1-201ENST00000563810 1770 ntBASIC15.25■□□□□ 0.03
CMC4P56277 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CMC4P56277 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CMC4P56277 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 AC087633.2-202ENST00000565166 1439 ntBASIC15.25■□□□□ 0.03
CMC4P56277 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CMC4P56277 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
CMC4P56277 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
CMC4P56277 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC15.24■□□□□ 0.03
CMC4P56277 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 ID1-201ENST00000376105 1233 ntBASIC15.24■□□□□ 0.03
CMC4P56277 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 METTL15-202ENST00000403099 795 ntTSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC15.24■□□□□ 0.03
CMC4P56277 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC15.24■□□□□ 0.03
CMC4P56277 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.24■□□□□ 0.03
CMC4P56277 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC15.24■□□□□ 0.03
CMC4P56277 GXYLT1P5-201ENST00000614548 1189 ntBASIC15.24■□□□□ 0.03
CMC4P56277 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 CYP21A1P-202ENST00000354927 1481 ntBASIC15.24■□□□□ 0.03
CMC4P56277 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC15.24■□□□□ 0.03
CMC4P56277 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CMC4P56277 ERF-202ENST00000440177 2032 ntTSL 2 BASIC15.24■□□□□ 0.03
CMC4P56277 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC15.24■□□□□ 0.03
CMC4P56277 HCG11-201ENST00000411553 5696 ntBASIC15.23■□□□□ 0.03
CMC4P56277 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
CMC4P56277 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CMC4P56277 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.23■□□□□ 0.03
CMC4P56277 TSPY6P-201ENST00000448518 926 ntBASIC15.23■□□□□ 0.03
CMC4P56277 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC15.23■□□□□ 0.03
CMC4P56277 MIR2861-201ENST00000636310 90 ntBASIC15.23■□□□□ 0.03
CMC4P56277 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
CMC4P56277 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC15.23■□□□□ 0.03
CMC4P56277 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
CMC4P56277 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.22■□□□□ 0.03
CMC4P56277 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
CMC4P56277 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.22■□□□□ 0.03
CMC4P56277 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
CMC4P56277 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.22■□□□□ 0.03
CMC4P56277 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
CMC4P56277 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.22■□□□□ 0.03
CMC4P56277 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms