Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.53■□□□□ 0.88
NUBP1P53384 AC006011.2-201ENST00000621313 1158 ntBASIC20.53■□□□□ 0.88
NUBP1P53384 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.53■□□□□ 0.88
NUBP1P53384 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
NUBP1P53384 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
NUBP1P53384 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
NUBP1P53384 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.53■□□□□ 0.88
NUBP1P53384 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.52■□□□□ 0.88
NUBP1P53384 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.52■□□□□ 0.88
NUBP1P53384 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUBP1P53384 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
NUBP1P53384 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NUBP1P53384 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.52■□□□□ 0.88
NUBP1P53384 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC20.52■□□□□ 0.88
NUBP1P53384 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
NUBP1P53384 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC20.52■□□□□ 0.88
NUBP1P53384 AC004264.1-201ENST00000608354 794 ntBASIC20.52■□□□□ 0.88
NUBP1P53384 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUBP1P53384 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.52■□□□□ 0.88
NUBP1P53384 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUBP1P53384 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
NUBP1P53384 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NUBP1P53384 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
NUBP1P53384 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC20.52■□□□□ 0.87
NUBP1P53384 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
NUBP1P53384 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.51■□□□□ 0.87
NUBP1P53384 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
NUBP1P53384 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.51■□□□□ 0.87
NUBP1P53384 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.51■□□□□ 0.87
NUBP1P53384 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
NUBP1P53384 AC004812.2-201ENST00000611079 2094 ntBASIC20.51■□□□□ 0.87
NUBP1P53384 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 BX664615.1-201ENST00000443558 458 ntBASIC20.51■□□□□ 0.87
NUBP1P53384 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.51■□□□□ 0.87
NUBP1P53384 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
NUBP1P53384 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.51■□□□□ 0.87
NUBP1P53384 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC20.51■□□□□ 0.87
NUBP1P53384 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 AC003102.1-202ENST00000563394 1796 ntBASIC20.51■□□□□ 0.87
NUBP1P53384 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
NUBP1P53384 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
NUBP1P53384 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 AC116050.2-201ENST00000612102 1779 ntBASIC20.5■□□□□ 0.87
NUBP1P53384 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.5■□□□□ 0.87
NUBP1P53384 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.5■□□□□ 0.87
NUBP1P53384 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
NUBP1P53384 AC009947.2-201ENST00000444014 672 ntBASIC20.5■□□□□ 0.87
NUBP1P53384 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 AC063952.2-201ENST00000498792 1227 ntBASIC20.5■□□□□ 0.87
NUBP1P53384 AC022616.7-201ENST00000525383 220 ntBASIC20.5■□□□□ 0.87
NUBP1P53384 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 AC010203.1-204ENST00000548782 407 ntBASIC20.5■□□□□ 0.87
NUBP1P53384 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NUBP1P53384 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
NUBP1P53384 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.49■□□□□ 0.87
NUBP1P53384 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUBP1P53384 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUBP1P53384 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.49■□□□□ 0.87
NUBP1P53384 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUBP1P53384 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.49■□□□□ 0.87
NUBP1P53384 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NUBP1P53384 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NUBP1P53384 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
NUBP1P53384 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.49■□□□□ 0.87
NUBP1P53384 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.49■□□□□ 0.87
NUBP1P53384 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.49■□□□□ 0.87
NUBP1P53384 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.49■□□□□ 0.87
NUBP1P53384 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.49■□□□□ 0.87
NUBP1P53384 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.48■□□□□ 0.87
NUBP1P53384 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC20.48■□□□□ 0.87
NUBP1P53384 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NUBP1P53384 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.48■□□□□ 0.87
NUBP1P53384 RN7SL371P-201ENST00000578099 267 ntBASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms