Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 DUSP5P2-201ENST00000426873 1033 ntBASIC20.09■□□□□ 0.81
CLCNKAP51800 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20.09■□□□□ 0.81
CLCNKAP51800 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCNKAP51800 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.09■□□□□ 0.81
CLCNKAP51800 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCNKAP51800 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
CLCNKAP51800 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.09■□□□□ 0.81
CLCNKAP51800 AC007375.3-201ENST00000600936 2314 ntBASIC20.09■□□□□ 0.81
CLCNKAP51800 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.09■□□□□ 0.81
CLCNKAP51800 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.09■□□□□ 0.81
CLCNKAP51800 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
CLCNKAP51800 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCNKAP51800 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 AC121338.2-201ENST00000622535 1744 ntBASIC20.08■□□□□ 0.81
CLCNKAP51800 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.08■□□□□ 0.81
CLCNKAP51800 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
CLCNKAP51800 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 PGM5P4-201ENST00000421970 445 ntBASIC20.08■□□□□ 0.81
CLCNKAP51800 CD99P1-205ENST00000527459 561 ntBASIC20.08■□□□□ 0.81
CLCNKAP51800 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
CLCNKAP51800 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC20.08■□□□□ 0.81
CLCNKAP51800 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCNKAP51800 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
CLCNKAP51800 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
CLCNKAP51800 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCNKAP51800 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCNKAP51800 AC087633.2-202ENST00000565166 1439 ntBASIC20.08■□□□□ 0.8
CLCNKAP51800 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.08■□□□□ 0.8
CLCNKAP51800 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
CLCNKAP51800 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCNKAP51800 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLCNKAP51800 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCNKAP51800 AC005229.4-201ENST00000610085 2198 ntBASIC20.07■□□□□ 0.8
CLCNKAP51800 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
CLCNKAP51800 BET1L-207ENST00000529614 560 ntTSL 5 BASIC20.07■□□□□ 0.8
CLCNKAP51800 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
CLCNKAP51800 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.07■□□□□ 0.8
CLCNKAP51800 AC083880.1-201ENST00000608266 535 ntBASIC20.07■□□□□ 0.8
CLCNKAP51800 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCNKAP51800 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
CLCNKAP51800 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
CLCNKAP51800 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
CLCNKAP51800 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLCNKAP51800 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.06■□□□□ 0.8
CLCNKAP51800 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC20.06■□□□□ 0.8
CLCNKAP51800 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC20.06■□□□□ 0.8
CLCNKAP51800 AC105020.6-201ENST00000621523 1217 ntBASIC20.06■□□□□ 0.8
CLCNKAP51800 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
CLCNKAP51800 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CLCNKAP51800 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
CLCNKAP51800 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
CLCNKAP51800 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.05■□□□□ 0.8
CLCNKAP51800 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CLCNKAP51800 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCNKAP51800 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
CLCNKAP51800 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.05■□□□□ 0.8
CLCNKAP51800 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.05■□□□□ 0.8
CLCNKAP51800 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCNKAP51800 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC20.05■□□□□ 0.8
CLCNKAP51800 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.05■□□□□ 0.8
CLCNKAP51800 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CLCNKAP51800 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.05■□□□□ 0.8
CLCNKAP51800 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CLCNKAP51800 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCNKAP51800 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCNKAP51800 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCNKAP51800 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCNKAP51800 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCNKAP51800 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.04■□□□□ 0.8
CLCNKAP51800 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.04■□□□□ 0.8
CLCNKAP51800 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CLCNKAP51800 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.04■□□□□ 0.8
CLCNKAP51800 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.04■□□□□ 0.8
CLCNKAP51800 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CLCNKAP51800 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms