Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
PCP4P48539 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.24□□□□□ -0.13
PCP4P48539 AL390961.4-201ENST00000623958 2535 ntBASIC14.23□□□□□ -0.13
PCP4P48539 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC14.23□□□□□ -0.13
PCP4P48539 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
PCP4P48539 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC14.23□□□□□ -0.13
PCP4P48539 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
PCP4P48539 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC14.23□□□□□ -0.13
PCP4P48539 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
PCP4P48539 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.23□□□□□ -0.13
PCP4P48539 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC14.23□□□□□ -0.13
PCP4P48539 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC14.23□□□□□ -0.13
PCP4P48539 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
PCP4P48539 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
PCP4P48539 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
PCP4P48539 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC14.22□□□□□ -0.13
PCP4P48539 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
PCP4P48539 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCP4P48539 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCP4P48539 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 ESRRAP2-201ENST00000418437 1549 ntBASIC14.22□□□□□ -0.13
PCP4P48539 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.22□□□□□ -0.13
PCP4P48539 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.22□□□□□ -0.13
PCP4P48539 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.22□□□□□ -0.13
PCP4P48539 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
PCP4P48539 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCP4P48539 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.21□□□□□ -0.13
PCP4P48539 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC14.21□□□□□ -0.13
PCP4P48539 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
PCP4P48539 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.21□□□□□ -0.13
PCP4P48539 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCP4P48539 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCP4P48539 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PCP4P48539 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCP4P48539 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCP4P48539 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCP4P48539 LBX2-AS1-202ENST00000603175 2083 ntBASIC14.21□□□□□ -0.14
PCP4P48539 CROCCP1-201ENST00000426910 5675 ntBASIC14.21□□□□□ -0.14
PCP4P48539 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
PCP4P48539 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.2□□□□□ -0.14
PCP4P48539 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC14.2□□□□□ -0.14
PCP4P48539 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCP4P48539 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.2□□□□□ -0.14
PCP4P48539 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC14.2□□□□□ -0.14
PCP4P48539 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC14.2□□□□□ -0.14
PCP4P48539 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.2□□□□□ -0.14
PCP4P48539 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC14.2□□□□□ -0.14
PCP4P48539 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCP4P48539 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC14.2□□□□□ -0.14
PCP4P48539 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms