Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.46■□□□□ 0.71
GABRA4P48169 POU5F1P3-201ENST00000428824 1078 ntBASIC19.46■□□□□ 0.71
GABRA4P48169 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.46■□□□□ 0.71
GABRA4P48169 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC19.46■□□□□ 0.71
GABRA4P48169 UNC93B5-201ENST00000530315 699 ntBASIC19.46■□□□□ 0.71
GABRA4P48169 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC19.46■□□□□ 0.71
GABRA4P48169 C2orf69P4-201ENST00000565394 541 ntBASIC19.46■□□□□ 0.71
GABRA4P48169 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.46■□□□□ 0.71
GABRA4P48169 MIR2861-201ENST00000636310 90 ntBASIC19.46■□□□□ 0.71
GABRA4P48169 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC19.46■□□□□ 0.71
GABRA4P48169 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
GABRA4P48169 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.45■□□□□ 0.7
GABRA4P48169 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
GABRA4P48169 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.45■□□□□ 0.7
GABRA4P48169 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.45■□□□□ 0.7
GABRA4P48169 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.45■□□□□ 0.7
GABRA4P48169 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.45■□□□□ 0.7
GABRA4P48169 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 AC060766.5-201ENST00000590539 871 ntBASIC19.45■□□□□ 0.7
GABRA4P48169 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
GABRA4P48169 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.45■□□□□ 0.7
GABRA4P48169 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
GABRA4P48169 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GABRA4P48169 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GABRA4P48169 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.44■□□□□ 0.7
GABRA4P48169 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
GABRA4P48169 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
GABRA4P48169 PLK5-205ENST00000642079 1969 ntBASIC19.44■□□□□ 0.7
GABRA4P48169 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
GABRA4P48169 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GABRA4P48169 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.43■□□□□ 0.7
GABRA4P48169 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC19.43■□□□□ 0.7
GABRA4P48169 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.43■□□□□ 0.7
GABRA4P48169 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC19.43■□□□□ 0.7
GABRA4P48169 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.43■□□□□ 0.7
GABRA4P48169 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.43■□□□□ 0.7
GABRA4P48169 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
GABRA4P48169 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.43■□□□□ 0.7
GABRA4P48169 TMEM191A-211ENST00000637163 1067 ntBASIC19.43■□□□□ 0.7
GABRA4P48169 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
GABRA4P48169 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.43■□□□□ 0.7
GABRA4P48169 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GABRA4P48169 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.42■□□□□ 0.7
GABRA4P48169 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GABRA4P48169 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.42■□□□□ 0.7
GABRA4P48169 ADM-205ENST00000528544 586 ntTSL 2 BASIC19.42■□□□□ 0.7
GABRA4P48169 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 KRT8P36-201ENST00000489121 1440 ntBASIC19.42■□□□□ 0.7
GABRA4P48169 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GABRA4P48169 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GABRA4P48169 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRA4P48169 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GABRA4P48169 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.41■□□□□ 0.7
GABRA4P48169 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms