Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC30.96■■■□□ 2.55
KDM5CP41229 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 FAM99A-202ENST00000538190 1989 ntBASIC30.96■■■□□ 2.55
KDM5CP41229 AL356652.1-201ENST00000615962 565 ntBASIC30.96■■■□□ 2.55
KDM5CP41229 MIR6786-201ENST00000616843 113 ntBASIC30.96■■■□□ 2.55
KDM5CP41229 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC30.96■■■□□ 2.55
KDM5CP41229 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC30.96■■■□□ 2.55
KDM5CP41229 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC30.96■■■□□ 2.55
KDM5CP41229 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
KDM5CP41229 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC30.96■■■□□ 2.55
KDM5CP41229 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
KDM5CP41229 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
KDM5CP41229 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC30.95■■■□□ 2.55
KDM5CP41229 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC30.95■■■□□ 2.55
KDM5CP41229 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC30.95■■■□□ 2.54
KDM5CP41229 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC30.95■■■□□ 2.54
KDM5CP41229 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC30.95■■■□□ 2.54
KDM5CP41229 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC30.95■■■□□ 2.54
KDM5CP41229 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC30.95■■■□□ 2.54
KDM5CP41229 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.54
KDM5CP41229 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC30.95■■■□□ 2.54
KDM5CP41229 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC30.95■■■□□ 2.54
KDM5CP41229 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC30.94■■■□□ 2.54
KDM5CP41229 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC30.94■■■□□ 2.54
KDM5CP41229 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC30.94■■■□□ 2.54
KDM5CP41229 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
KDM5CP41229 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
KDM5CP41229 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC30.94■■■□□ 2.54
KDM5CP41229 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
KDM5CP41229 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC30.94■■■□□ 2.54
KDM5CP41229 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC30.94■■■□□ 2.54
KDM5CP41229 AC127496.7-201ENST00000625110 1798 ntBASIC30.94■■■□□ 2.54
KDM5CP41229 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
KDM5CP41229 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC30.93■■■□□ 2.54
KDM5CP41229 AF186192.3-201ENST00000583427 947 ntBASIC30.93■■■□□ 2.54
KDM5CP41229 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC30.93■■■□□ 2.54
KDM5CP41229 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
KDM5CP41229 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
KDM5CP41229 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
KDM5CP41229 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
KDM5CP41229 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
KDM5CP41229 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC30.93■■■□□ 2.54
KDM5CP41229 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 PGM5P4-201ENST00000421970 445 ntBASIC30.92■■■□□ 2.54
KDM5CP41229 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC30.92■■■□□ 2.54
KDM5CP41229 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 BRWD1-AS2-201ENST00000603064 1028 ntBASIC30.92■■■□□ 2.54
KDM5CP41229 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
KDM5CP41229 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC30.92■■■□□ 2.54
KDM5CP41229 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
KDM5CP41229 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC30.92■■■□□ 2.54
KDM5CP41229 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC30.92■■■□□ 2.54
KDM5CP41229 HES2-206ENST00000489730 730 ntTSL 2 BASIC30.92■■■□□ 2.54
KDM5CP41229 KRT8P9-201ENST00000558927 1449 ntBASIC30.91■■■□□ 2.54
KDM5CP41229 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC30.91■■■□□ 2.54
KDM5CP41229 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
KDM5CP41229 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC30.91■■■□□ 2.54
KDM5CP41229 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.91■■■□□ 2.54
KDM5CP41229 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
KDM5CP41229 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
KDM5CP41229 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC30.91■■■□□ 2.54
KDM5CP41229 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC30.91■■■□□ 2.54
KDM5CP41229 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
KDM5CP41229 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC30.91■■■□□ 2.54
KDM5CP41229 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC30.91■■■□□ 2.54
KDM5CP41229 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
KDM5CP41229 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
KDM5CP41229 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
KDM5CP41229 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
KDM5CP41229 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
KDM5CP41229 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC30.9■■■□□ 2.54
KDM5CP41229 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
KDM5CP41229 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC30.9■■■□□ 2.54
KDM5CP41229 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC30.9■■■□□ 2.54
KDM5CP41229 SAPCD2P4-201ENST00000424595 1171 ntBASIC30.9■■■□□ 2.54
KDM5CP41229 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC30.9■■■□□ 2.54
KDM5CP41229 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC30.9■■■□□ 2.54
KDM5CP41229 RBM42-202ENST00000586618 771 ntTSL 3 BASIC30.9■■■□□ 2.54
KDM5CP41229 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC30.9■■■□□ 2.54
KDM5CP41229 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
KDM5CP41229 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
KDM5CP41229 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC30.89■■■□□ 2.54
KDM5CP41229 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC30.89■■■□□ 2.54
KDM5CP41229 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC30.89■■■□□ 2.54
KDM5CP41229 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC30.89■■■□□ 2.54
KDM5CP41229 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
KDM5CP41229 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC30.89■■■□□ 2.54
KDM5CP41229 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC30.89■■■□□ 2.54
KDM5CP41229 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC30.89■■■□□ 2.54
KDM5CP41229 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.53
KDM5CP41229 SRI-203ENST00000419179 1307 ntTSL 2 BASIC30.89■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms