Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.68■□□□□ 0.9
HADHAP40939 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
HADHAP40939 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
HADHAP40939 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
HADHAP40939 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.67■□□□□ 0.9
HADHAP40939 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 AC006015.1-201ENST00000429970 570 ntBASIC20.67■□□□□ 0.9
HADHAP40939 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.67■□□□□ 0.9
HADHAP40939 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 AC010536.3-201ENST00000620306 533 ntBASIC20.67■□□□□ 0.9
HADHAP40939 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
HADHAP40939 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
HADHAP40939 AC116050.2-201ENST00000612102 1779 ntBASIC20.67■□□□□ 0.9
HADHAP40939 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 AC073314.1-201ENST00000568729 2216 ntBASIC20.66■□□□□ 0.9
HADHAP40939 PTPA-214ENST00000423100 988 ntTSL 2 BASIC20.66■□□□□ 0.9
HADHAP40939 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.66■□□□□ 0.9
HADHAP40939 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC20.66■□□□□ 0.9
HADHAP40939 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.66■□□□□ 0.9
HADHAP40939 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.66■□□□□ 0.9
HADHAP40939 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.66■□□□□ 0.9
HADHAP40939 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.66■□□□□ 0.9
HADHAP40939 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
HADHAP40939 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
HADHAP40939 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.66■□□□□ 0.9
HADHAP40939 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
HADHAP40939 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC20.65■□□□□ 0.9
HADHAP40939 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.65■□□□□ 0.9
HADHAP40939 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.65■□□□□ 0.9
HADHAP40939 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 AC022517.1-201ENST00000592429 346 ntBASIC20.65■□□□□ 0.9
HADHAP40939 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
HADHAP40939 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
HADHAP40939 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
HADHAP40939 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.65■□□□□ 0.9
HADHAP40939 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
HADHAP40939 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
HADHAP40939 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HADHAP40939 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
HADHAP40939 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.64■□□□□ 0.89
HADHAP40939 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
HADHAP40939 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HADHAP40939 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.64■□□□□ 0.89
HADHAP40939 AC091799.1-201ENST00000422823 811 ntBASIC20.64■□□□□ 0.89
HADHAP40939 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
HADHAP40939 TERF1P5-201ENST00000477545 1207 ntBASIC20.64■□□□□ 0.89
HADHAP40939 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.64■□□□□ 0.89
HADHAP40939 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC20.64■□□□□ 0.89
HADHAP40939 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC20.64■□□□□ 0.89
HADHAP40939 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HADHAP40939 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.64■□□□□ 0.89
HADHAP40939 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.64■□□□□ 0.89
HADHAP40939 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
HADHAP40939 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.63■□□□□ 0.89
HADHAP40939 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
HADHAP40939 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
HADHAP40939 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
HADHAP40939 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
HADHAP40939 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
HADHAP40939 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms